ENSGALG00000035980


Gallus gallus

Features
Gene ID: ENSGALG00000035980
  
Biological name :REXO2
  
Synonyms : oligoribonuclease, mitochondrial / REXO2
  
Possible biological names infered from orthology : Mus musculus RNA exonuclease 2 (Rexo2), transcript variant 3, mRNA. / Q9D8S4 / Q9Y3B8 / RNA exonuclease 2
  
Species: Gallus gallus
  
Chr. number: 24
Strand: 1
Band:
Gene start: 4564832
Gene end: 4570788
  
Corresponding Affymetrix probe sets: Gga.3122.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057865
Ensembl peptide - ENSGALP00000060421
Ensembl peptide - ENSGALP00000059157
NCBI entrez gene - 419761     See in Manteia.
RefSeq - NM_001278120
RefSeq Peptide - NP_001265049
swissprot - A0A1L1RNQ3
swissprot - A0A1L1RK74
swissprot - A0A1D5PY16
Ensembl - ENSGALG00000035980
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smfnENSDARG00000009806Danio rerio
 REXO2ENSG00000076043Homo sapiens
 Rexo2ENSMUSG00000032026Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012337  Ribonuclease H-like superfamily
 IPR013520  Exonuclease, RNase T/DNA polymerase III
 IPR022894  Oligoribonuclease


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006139 nucleobase-containing compound metabolic process IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005925 focal adhesion IEA
 molecular_functionGO:0000175 3"-5"-exoribonuclease activity IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008408 3"-5" exonuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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