ENSG00000083937


Homo sapiens

Features
Gene ID: ENSG00000083937
  
Biological name :CHMP2B
  
Synonyms : charged multivesicular body protein 2B / CHMP2B / Q9UQN3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p11.2
Gene start: 87227271
Gene end: 87255548
  
Corresponding Affymetrix probe sets: 202536_at (Human Genome U133 Plus 2.0 Array)   202537_s_at (Human Genome U133 Plus 2.0 Array)   202538_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000263780
Ensembl peptide - ENSP00000480032
Ensembl peptide - ENSP00000419998
Ensembl peptide - ENSP00000418920
NCBI entrez gene - 25978     See in Manteia.
OMIM - 609512
RefSeq - XM_011533576
RefSeq - NM_001244644
RefSeq - NM_014043
RefSeq Peptide - NP_001231573
RefSeq Peptide - NP_054762
swissprot - Q9UQN3
swissprot - C9J0A7
swissprot - A0A087WW88
swissprot - B2RE76
Ensembl - ENSG00000083937
  
Related genetic diseases (OMIM): 600795 - Dementia, familial, nonspecific, 600795
  614696 - Amyotrophic lateral sclerosis 17, 614696
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chmp2baENSDARG00000068683Danio rerio
 Q6NXD2ENSDARG00000002190Danio rerio
 CHMP2BENSGALG00000015496Gallus gallus
 Chmp2bENSMUSG00000004843Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHMP2A / O43633 / charged multivesicular body protein 2AENSG0000013072432


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000920 cell separation after cytokinesis IMP
 biological_processGO:0006914 autophagy TAS
 biological_processGO:0006997 nucleus organization IMP
 biological_processGO:0007032 endosome organization IMP
 biological_processGO:0007034 vacuolar transport IEA
 biological_processGO:0007080 mitotic metaphase plate congression IMP
 biological_processGO:0010824 regulation of centrosome duplication IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport TAS
 biological_processGO:0016236 macroautophagy TAS
 biological_processGO:0019058 viral life cycle TAS
 biological_processGO:0036258 multivesicular body assembly TAS
 biological_processGO:0039702 viral budding via host ESCRT complex IMP
 biological_processGO:0050890 cognition IMP
 biological_processGO:0061763 multivesicular body-lysosome fusion TAS
 biological_processGO:0070050 neuron cellular homeostasis IMP
 biological_processGO:1901673 regulation of mitotic spindle assembly IMP
 biological_processGO:1902188 positive regulation of viral release from host cell IMP
 biological_processGO:1904903 ESCRT III complex disassembly NAS
 cellular_componentGO:0000815 ESCRT III complex IDA
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IDA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
Budding and maturation of HIV virion
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
Show

 HP:0000217 Xerostomia "Dryness of the mouth due to salivary gland dysfunction." [HPO:curators]
Show

 HP:0000474 Excess nuchal skin 
Show

 HP:0000709 Psychosis "A condition characterized by changes of personality and thought patterns often accompanied by hallucinations and delusional beliefs." [HPO:curators]
Show

 HP:0000710 Hyperorality 
Show

 HP:0000711 Restlessness 
Show

 HP:0000712 Emotional lability 
Show

 HP:0000713 Agitation 
Show

 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
Show

 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
Show

 HP:0000719 Inappropriate behavior 
Show

 HP:0000723 Restrictive behaviour, interests, and activities 
Show

 HP:0000726 Dementia 
Show

 HP:0000733 Stereotyped, repetitive behaviour 
Show

 HP:0000734 Disinhibition 
Show

 HP:0000737 Irritability 
Show

 HP:0000739 Anxiety 
Show

 HP:0000741 Apathy 
Show

 HP:0000743 Frontal release signs 
Show

 HP:0000751 Personality changes 
Show

 HP:0000757 Lack of insight 
Show

 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
Show

 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
Show

 HP:0001265 Hyporeflexia 
Show

 HP:0001284 Areflexia 
Show

 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
Show

 HP:0001300 Parkinsonism 
Show

 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
Show

 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
Show

 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
Show

 HP:0001348 Brisk reflexes 
Show

 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
Show

 HP:0002017 Nausea and vomiting 
Show

 HP:0002063 Rigidity 
Show

 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
Show

 HP:0002071 Extrapyramidal signs 
Show

 HP:0002094 Dyspnea 
Show

 HP:0002120 Cerebral cortical atrophy 
Show

 HP:0002145 Frontotemporal dementia 
Show

 HP:0002180 Neurodegeneration 
Show

 HP:0002186 Apraxia "A defect in the understanding of complex motor commands and in the execution of certain learned movements, i.e., deficits in the cognitive components of learned movements." [HPO:curators]
Show

 HP:0002300 Mutism 
Show

 HP:0002310 Orofacial dyskinesia 
Show

 HP:0002354 Memory impairment 
Show

 HP:0002357 Dysphasia 
Show

 HP:0002366 Lower motor neuron signs 
Show

 HP:0002371 Loss of speech 
Show

 HP:0002380 Fasciculations "Fasciculations are observed as small, local, involuntary muscle contractions (twitching) visible under the skin. Fasciculations result from increased irritability of an axon (which in turn is often a manifestation of disease of a motor neuron). This leads to sporadic discharges of all the muscle fibers controlled by the axon in isolation from other motor units." [HPO:curators]
Show

 HP:0002381 Aphasia 
Show

 HP:0002427 Motor aphasia 
Show

 HP:0002442 Dyscalculia 
Show

 HP:0002446 Astrocytosis 
Show

 HP:0002465 Poor speech 
Show

 HP:0002483 Bulbar signs 
Show

 HP:0002493 Corticospinal tract dysfunction 
Show

 HP:0002500 Abnormality of the cerebral white matter 
Show

 HP:0002529 Neuropathology shows neuronal loss in basal ganglia, brainstem, and cerebellum 
Show

 HP:0002747 Respiratory insufficiency due to muscle weakness 
Show

 HP:0002878 Early respiratory failure 
Show

 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
Show

 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
Show

 HP:0003394 Muscle cramps 
Show

 HP:0003470 Paralysis "Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement." [HPO:curators]
Show

 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
Show

 HP:0003581 Onset in adulthood 
Show

 HP:0003678 Rapidly progressive 
Show

 HP:0005945 Laryngeal obstruction 
Show

 HP:0006892 Cerebral atrophy, frontotemporal, progressive 
Show

 HP:0006977 Grammar-specific speech disorder 
Show

 HP:0007112 Mri shows frontal and temporal cortical atrophy 
Show

 HP:0007354 Amyotrophic lateral sclerosis 
Show

 HP:0010522 Dyslexia "A learning disorder characterized primarily by difficulties in learning to read and spell. Dyslectic children also exhibit a tendency to read words from right to left and to confuse letters such as b and d whose orientation is important for their identification. Children with dyslexia appear to be impaired in phonemic skills (the ability to associate visual symbols with the sounds they represent)." [HPO:curators]
Show

 HP:0010523 Alexia "An acquired type of sensory aphasia where damage to the brain leads to the loss of the ability to read." [HPO:curators]
Show

 HP:0010526 Dysgraphia "A writing disability in the absence of motor or sensory deficits of the upper extremities, resulting in an impairment in the ability to write regardless of the ability to read and not due to intellectual impairment." [HPO:curators]
Show

 HP:0010529 Echolalia "The tendency to repeat vocalizations made by another person." [HPO:curators]
Show

 HP:0011204 EEG with continuous slow activity "EEG showing diffuse slowing without interruption." [HPO:jalbers]
Show

 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
Show

 HP:0012444 Brain atrophy "Partial or complete wasting (loss) of brain tissue that was once present." [HPO:probinson]
Show

 HP:0012531 Pain "An unpleasant sensory and emotional experience associated with actual or potential tissue damage, or described in terms of such damage." [ORCID:0000-0001-5208-3432]
Show

 HP:0012658 Abnormal brain FDG positron emission tomography "An anomaly detectable in [18F]-fluorodeoxyglucose (FDG) positron emission tomography (PET) brain scans. Glucose uptake measured with FDG-PET is a marker of neuronal metabolic activity." [HPO:probinson]
Show

 HP:0012671 Abulia "Poverty of behavior and speech output, lack of initiative, loss of emotional responses, psychomotor slowing, and prolonged speech latency." [HPO:probinson, pmid:16030444, UToronto:HTrang]
Show

 HP:0030195 Fatigable weakness of swallowing muscles "A type of weakness of the muscles involved in swallowing that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [pmid:17986328, UK:rheller]
Show

 HP:0030196 Fatigable weakness of respiratory muscles "A type of weakness of the muscles involved in breathing (respiration) that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [UNCL:mbertoli]
Show

 HP:0030212 Collectionism "Excessive or pathological tendency to save and collect possessions." []
Show

 HP:0030213 Emotional blunting "Lack of emotional reactivity and empathy for situations or persons, sometime also for family members." [ICM:PCaroppo]
Show

 HP:0030222 Visual agnosia "Difficulty in recognizing objects by visual input in absence of sensorial visual impairment." [ICM:PCaroppo]
Show

 HP:0030223 Perseveration "Perseveration can be defined as the contextually inappropriate and unintentional repetition of a response or behavioral unit. In other words, the observed repetitiveness does not meet the demands of the situation, is not the product of deliberation, and may even unfold despite counterintention. Perseveration can therefore be differentiated from goal-directed and intentional forms of repetition, such as linguistic redundancies designed to enhance communicative or poetic impact." [HPO:probinson, pmid:9050113]
Show

 HP:0030391 Spoken Word Recognition Deficit "Reduced ability of lexical discrimination, which refers to the process of distinguishing a stimulus word from other phonologically similar words. Lexical discrimination can be defined as the process of correctly identifying words in the mental lexicon to match the phonological input of a stimulus." [HPO:probinson]
Show

 HP:0030784 Anomia "An inability to name people and objects that are correctly perceived. The individual is able to describe the object in question, but cannot provide the name." [] {comment="HPO:probinson"}
Show

 HP:0100256 Senile plaques "Senile plaques are extracellular deposits of amyloid in the gray matter of the brain." [HPO:sdoelken]
Show

 HP:0500014 Abnormal test result "Abnormal finding in a diagnostic test or assay." []
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr