ENSG00000085415


Homo sapiens

Features
Gene ID: ENSG00000085415
  
Biological name :SEH1L
  
Synonyms : Q96EE3 / SEH1L / SEH1 like nucleoporin
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: 1
Band: p11.21
Gene start: 12947133
Gene end: 12987536
  
Corresponding Affymetrix probe sets: 221931_s_at (Human Genome U133 Plus 2.0 Array)   223225_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467605
Ensembl peptide - ENSP00000466959
Ensembl peptide - ENSP00000467276
Ensembl peptide - ENSP00000262124
Ensembl peptide - ENSP00000382779
Ensembl peptide - ENSP00000466234
NCBI entrez gene - 81929     See in Manteia.
OMIM - 609263
RefSeq - XM_017026027
RefSeq - XM_011525742
RefSeq - XM_011525743
RefSeq - XM_011525744
RefSeq - XM_011525745
RefSeq - XM_011525746
RefSeq - XM_017026025
RefSeq - XM_017026026
RefSeq - NM_001013437
RefSeq - NM_031216
RefSeq - XM_005258152
RefSeq Peptide - NP_001013455
RefSeq Peptide - NP_112493
swissprot - K7EPZ5
swissprot - K7ENI5
swissprot - K7ELV2
swissprot - Q96EE3
swissprot - K7EP88
Ensembl - ENSG00000085415
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 seh1lENSDARG00000004280Danio rerio
 SEH1LENSGALG00000013872Gallus gallus
 Seh1lENSMUSG00000079614Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily
 IPR037363  Sec13/Seh1 family
 IPR037597  Nucleoporin Seh1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002534 cytokine production involved in inflammatory response IEA
 biological_processGO:0006110 regulation of glycolytic process TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0006409 tRNA export from nucleus TAS
 biological_processGO:0006999 nuclear pore organization IMP
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007059 chromosome segregation IEA
 biological_processGO:0007062 sister chromatid cohesion TAS
 biological_processGO:0007077 mitotic nuclear envelope disassembly TAS
 biological_processGO:0007080 mitotic metaphase plate congression IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016032 viral process TAS
 biological_processGO:0016925 protein sumoylation TAS
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0032008 positive regulation of TOR signaling IMP
 biological_processGO:0034198 cellular response to amino acid starvation IMP
 biological_processGO:0034629 cellular protein-containing complex localization IMP
 biological_processGO:0050830 defense response to Gram-positive bacterium IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051315 attachment of mitotic spindle microtubules to kinetochore IMP
 biological_processGO:0060964 regulation of gene silencing by miRNA TAS
 biological_processGO:0075733 intracellular transport of virus TAS
 biological_processGO:1900034 regulation of cellular response to heat TAS
 biological_processGO:1904263 positive regulation of TORC1 signaling IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope TAS
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031080 nuclear pore outer ring NAS
 cellular_componentGO:0043657 host cell IEA
 cellular_componentGO:0061700 GATOR2 complex IDA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0017056 structural constituent of nuclear pore IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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