ENSGALG00000013872


Gallus gallus

Features
Gene ID: ENSGALG00000013872
  
Biological name :SEH1L
  
Synonyms : SEH1L / SEH1 like nucleoporin
  
Possible biological names infered from orthology : Nucleoporin SEH1 / Q8R2U0 / Q96EE3
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 97203525
Gene end: 97216138
  
Corresponding Affymetrix probe sets: Gga.17705.1.S1_at (Chicken Array)   GgaAffx.24299.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022457
Ensembl peptide - ENSGALP00000059270
Ensembl peptide - ENSGALP00000058874
Ensembl peptide - ENSGALP00000049416
Ensembl peptide - ENSGALP00000045910
NCBI entrez gene - 100859886     See in Manteia.
RefSeq - XM_003640799
RefSeq - XM_015282472
swissprot - A0A1L1RJF4
swissprot - E1BYP7
swissprot - A0A1D5NZU0
swissprot - A0A1D5P9L2
swissprot - A0A1L1RKI2
Ensembl - ENSGALG00000013872
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 seh1lENSDARG00000004280Danio rerio
 SEH1LENSG00000085415Homo sapiens
 Seh1lENSMUSG00000079614Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002534 cytokine production involved in inflammatory response IEA
 biological_processGO:0006999 nuclear pore organization IEA
 biological_processGO:0007080 mitotic metaphase plate congression IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032008 positive regulation of TOR signaling IEA
 biological_processGO:0034198 cellular response to amino acid starvation IEA
 biological_processGO:0034629 cellular protein-containing complex localization IEA
 biological_processGO:0050830 defense response to Gram-positive bacterium IEA
 biological_processGO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA
 biological_processGO:1904263 positive regulation of TORC1 signaling IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0031080 nuclear pore outer ring IEA
 cellular_componentGO:0061700 GATOR2 complex IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Transport of Mature mRNA derived from an Intron-Containing Transcript
snRNP Assembly
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs
RHO GTPases Activate Formins
Mitotic Prometaphase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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