ENSG00000085872


Homo sapiens

Features
Gene ID: ENSG00000085872
  
Biological name :CHERP
  
Synonyms : calcium homeostasis endoplasmic reticulum protein / CHERP / Q8IWX8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.11
Gene start: 16517889
Gene end: 16542530
  
Corresponding Affymetrix probe sets: 1568704_a_at (Human Genome U133 Plus 2.0 Array)   202229_s_at (Human Genome U133 Plus 2.0 Array)   202230_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000198939
Ensembl peptide - ENSP00000439856
NCBI entrez gene - 10523     See in Manteia.
RefSeq - NM_006387
RefSeq Peptide - NP_006378
swissprot - J3QK89
swissprot - Q8IWX8
Ensembl - ENSG00000085872
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cherpENSDARG00000021812Danio rerio
 CHERPENSGALG00000003824Gallus gallus
 CherpENSMUSG00000052488Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR000467  G-patch domain
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS
 IPR035967  SWAP/Surp superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IDA
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0008285 negative regulation of cell proliferation IDA
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IMP
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0044325 ion channel binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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