ENSGALG00000003824


Gallus gallus

Features
Gene ID: ENSGALG00000003824
  
Biological name :CHERP
  
Synonyms : calcium homeostasis endoplasmic reticulum protein / CHERP
  
Possible biological names infered from orthology : Mus musculus calcium homeostasis endoplasmic reticulum protein (Cherp), transcript variant 2, mRNA. / Q8IWX8
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 4335588
Gene end: 4347393
  
Corresponding Affymetrix probe sets: GgaAffx.12810.1.S1_s_at (Chicken Array)   GgaAffx.2386.2.S1_at (Chicken Array)   GgaAffx.2386.2.S1_s_at (Chicken Array)   GgaAffx.2386.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052633
Ensembl peptide - ENSGALP00000006050
NCBI entrez gene - 420144     See in Manteia.
RefSeq - XM_015300071
RefSeq - NM_001006341
RefSeq Peptide - NP_001006341
swissprot - A0A1D5PIK0
swissprot - F1NDZ9
Ensembl - ENSGALG00000003824
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cherpENSDARG00000021812Danio rerio
 CHERPENSG00000085872Homo sapiens
 CherpENSMUSG00000052488Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR000467  G-patch domain
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0044325 ion channel binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr