ENSMUSG00000052488


Mus musculus

Features
Gene ID: ENSMUSG00000052488
  
Biological name :Cherp
  
Synonyms : Cherp / Mus musculus calcium homeostasis endoplasmic reticulum protein (Cherp), transcript variant 2, mRNA.
  
Possible biological names infered from orthology : calcium homeostasis endoplasmic reticulum protein / Q8IWX8
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: B3.3
Gene start: 72460489
Gene end: 72475226
  
Corresponding Affymetrix probe sets: 10579703 (MoGene1.0st)   1431770_at (Mouse Genome 430 2.0 Array)   1436885_a_at (Mouse Genome 430 2.0 Array)   1451896_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148273
Ensembl peptide - ENSMUSP00000078469
NCBI entrez gene - 27967     See in Manteia.
MGI - MGI:106417
RefSeq - NM_138585
RefSeq - NM_001359024
RefSeq - XM_006509685
RefSeq Peptide - NP_001345953
RefSeq Peptide - NP_613051
swissprot - G5E8I8
swissprot - A0A1D5RL92
Ensembl - ENSMUSG00000052488
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cherpENSDARG00000021812Danio rerio
 CHERPENSGALG00000003824Gallus gallus
 CHERPENSG00000085872Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR000467  G-patch domain
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS
 IPR035967  SWAP/Surp superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0044325 ion channel binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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