ENSG00000100109


Homo sapiens

Features
Gene ID: ENSG00000100109
  
Biological name :TFIP11
  
Synonyms : Q9UBB9 / TFIP11 / tuftelin interacting protein 11
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q12.1
Gene start: 26491225
Gene end: 26512505
  
Corresponding Affymetrix probe sets: 202750_s_at (Human Genome U133 Plus 2.0 Array)   202751_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411840
Ensembl peptide - ENSP00000480171
Ensembl peptide - ENSP00000383892
Ensembl peptide - ENSP00000384297
Ensembl peptide - ENSP00000384421
Ensembl peptide - ENSP00000385861
Ensembl peptide - ENSP00000394266
Ensembl peptide - ENSP00000397475
Ensembl peptide - ENSP00000399347
Ensembl peptide - ENSP00000404973
NCBI entrez gene - 24144     See in Manteia.
RefSeq - XM_017028735
RefSeq - NM_001008697
RefSeq - NM_001346857
RefSeq - NM_001346859
RefSeq - NM_001346861
RefSeq - NM_001346862
RefSeq - NM_012143
RefSeq - XM_011530079
RefSeq Peptide - NP_001333791
RefSeq Peptide - NP_036275
RefSeq Peptide - NP_001008697
RefSeq Peptide - NP_001333786
RefSeq Peptide - NP_001333787
RefSeq Peptide - NP_001333788
RefSeq Peptide - NP_001333790
swissprot - F6SQZ1
swissprot - F6UKU9
swissprot - Q9UBB9
swissprot - A0A024R1I7
swissprot - F6UQ07
swissprot - F6XM96
swissprot - H0Y4U8
Ensembl - ENSG00000100109
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfip11ENSDARG00000056932Danio rerio
 Q5ZII9ENSGALG00000005623Gallus gallus
 Q9ERA6ENSMUSG00000029345Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR022159  Tuftelin interacting protein, N-terminal domain
 IPR022783  GC-rich sequence DNA-binding factor-like domain
 IPR024933  Septin and tuftelin interacting protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000390 spliceosomal complex disassembly IMP
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006396 RNA processing IC
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0031214 biomineral tissue development IEA
 biological_processGO:0031333 negative regulation of protein complex assembly IDA
 biological_processGO:0031848 protection from non-homologous end joining at telomere IC
 biological_processGO:0032091 negative regulation of protein binding IDA
 biological_processGO:1904876 negative regulation of DNA ligase activity IC
 biological_processGO:2001033 negative regulation of double-strand break repair via nonhomologous end joining ISS
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0071008 U2-type post-mRNA release spliceosomal complex IDA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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