ENSGALG00000005623


Gallus gallus

Features
Gene ID: ENSGALG00000005623
  
Biological name :TFIP11
  
Synonyms : Q5ZII9 / TFIP11 / Tuftelin-interacting protein 11
  
Possible biological names infered from orthology : Q9ERA6 / Q9UBB9
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 7206076
Gene end: 7216063
  
Corresponding Affymetrix probe sets: GgaAffx.12338.1.S1_s_at (Chicken Array)   GgaAffx.12557.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009008
Ensembl peptide - ENSGALP00000052803
NCBI entrez gene - 416909     See in Manteia.
RefSeq - NM_001030665
RefSeq Peptide - NP_001025836
swissprot - Q5ZII9
Ensembl - ENSGALG00000005623
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfip11ENSDARG00000056932Danio rerio
 Q9UBB9ENSG00000100109Homo sapiens
 Q9ERA6ENSMUSG00000029345Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR022159  Tuftelin interacting protein, N-terminal domain
 IPR022783  GC-rich sequence DNA-binding factor-like domain
 IPR024933  Septin and tuftelin interacting protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000390 spliceosomal complex disassembly IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0031333 negative regulation of protein complex assembly IEA
 biological_processGO:0032091 negative regulation of protein binding IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex ISS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071008 U2-type post-mRNA release spliceosomal complex IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr