ENSMUSG00000029345


Mus musculus

Features
Gene ID: ENSMUSG00000029345
  
Biological name :Tfip11
  
Synonyms : Q9ERA6 / Tfip11 / tuftelin interacting protein 11
  
Possible biological names infered from orthology : Q9UBB9
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: F
Gene start: 112326358
Gene end: 112338073
  
Corresponding Affymetrix probe sets: 10524353 (MoGene1.0st)   1418145_at (Mouse Genome 430 2.0 Array)   1448976_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000031288
Ensembl peptide - ENSMUSP00000142844
Ensembl peptide - ENSMUSP00000115225
NCBI entrez gene - 54723     See in Manteia.
MGI - MGI:1930075
RefSeq - NM_018783
RefSeq Peptide - NP_061253
swissprot - A0A0G2JEN8
swissprot - D3YWC8
swissprot - Q3TTV6
swissprot - Q9ERA6
Ensembl - ENSMUSG00000029345
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfip11ENSDARG00000056932Danio rerio
 Q5ZII9ENSGALG00000005623Gallus gallus
 Q9UBB9ENSG00000100109Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR022159  Tuftelin interacting protein, N-terminal domain
 IPR022783  GC-rich sequence DNA-binding factor-like domain
 IPR024933  Septin and tuftelin interacting protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000390 spliceosomal complex disassembly IMP
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0030154 cell differentiation NAS
 biological_processGO:0030198 extracellular matrix organization NAS
 biological_processGO:0031214 biomineral tissue development IEA
 biological_processGO:0031333 negative regulation of protein complex assembly IEA
 biological_processGO:0032091 negative regulation of protein binding IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005622 intracellular NAS
 cellular_componentGO:0005634 nucleus ISA
 cellular_componentGO:0005681 spliceosomal complex ISO
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071008 U2-type post-mRNA release spliceosomal complex IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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