ENSG00000100207


Homo sapiens

Features
Gene ID: ENSG00000100207
  
Biological name :TCF20
  
Synonyms : Q9UGU0 / TCF20 / transcription factor 20
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.2
Gene start: 42160013
Gene end: 42343616
  
Corresponding Affymetrix probe sets: 212931_at (Human Genome U133 Plus 2.0 Array)   215511_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000458948
Ensembl peptide - ENSP00000335561
Ensembl peptide - ENSP00000352463
Ensembl peptide - ENSP00000385531
NCBI entrez gene - 6942     See in Manteia.
OMIM - 603107
RefSeq - XM_011530354
RefSeq - NM_005650
RefSeq - NM_181492
RefSeq - XM_005261722
RefSeq - XM_006724313
RefSeq - XM_011530353
RefSeq Peptide - NP_005641
RefSeq Peptide - NP_852469
swissprot - Q9UGU0
swissprot - I3L1M7
swissprot - W5ZR30
swissprot - A9JX13
Ensembl - ENSG00000100207
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tcf20ENSDARG00000078348Danio rerio
 TCF20ENSGALG00000011878Gallus gallus
 Tcf20ENSMUSG00000041852Mus musculus
 Zfp957ENSMUSG00000071262Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAI1 / Q7Z5J4 / retinoic acid induced 1ENSG0000010855722


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0003677 DNA binding NAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003713 transcription coactivator activity NAS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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