ENSG00000100227


Homo sapiens

Features
Gene ID: ENSG00000100227
  
Biological name :POLDIP3
  
Synonyms : DNA polymerase delta interacting protein 3 / POLDIP3 / Q9BY77
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.2
Gene start: 42583721
Gene end: 42614962
  
Corresponding Affymetrix probe sets: 210583_at (Human Genome U133 Plus 2.0 Array)   212100_s_at (Human Genome U133 Plus 2.0 Array)   215357_s_at (Human Genome U133 Plus 2.0 Array)   243411_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000482500
Ensembl peptide - ENSP00000408046
Ensembl peptide - ENSP00000415234
Ensembl peptide - ENSP00000252115
Ensembl peptide - ENSP00000252116
Ensembl peptide - ENSP00000343060
Ensembl peptide - ENSP00000397927
NCBI entrez gene - 84271     See in Manteia.
OMIM - 611520
RefSeq - XM_017029011
RefSeq - NM_001278657
RefSeq - NM_032311
RefSeq - NM_178136
RefSeq - XM_011530457
RefSeq - XM_017029010
RefSeq Peptide - NP_001265586
RefSeq Peptide - NP_115687
RefSeq Peptide - NP_835237
swissprot - Q6R954
swissprot - F8WCX5
swissprot - F8WEE2
swissprot - Q8WUT1
swissprot - Q9BY77
swissprot - F6VRR5
Ensembl - ENSG00000100227
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poldip3ENSDARG00000099375Danio rerio
 POLDIP3ENSGALG00000011863Gallus gallus
 Q8BG81ENSMUSG00000041815Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034784  PDIP3, RNA recognition motif
 IPR034785  Polymerase delta-interacting protein 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IEA
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0045727 positive regulation of translation IMP
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000346 transcription export complex IDA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0035145 exon-exon junction complex IDA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000136937 NCBP1 / Q09161 / nuclear cap binding protein subunit 1  / complex
 ENSG00000114503 NCBP2 / P52298 / nuclear cap binding protein subunit 2  / complex






 

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