ENSMUSG00000041815


Mus musculus

Features
Gene ID: ENSMUSG00000041815
  
Biological name :Poldip3
  
Synonyms : Mus musculus polymerase (DNA-directed), delta interacting protein 3 (Poldip3), transcript variant 2, mRNA. / Poldip3 / Q8BG81
  
Possible biological names infered from orthology : DNA polymerase delta interacting protein 3 / Q9BY77
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E1
Gene start: 83125976
Gene end: 83149384
  
Corresponding Affymetrix probe sets: 10430945 (MoGene1.0st)   1434176_x_at (Mouse Genome 430 2.0 Array)   1437335_x_at (Mouse Genome 430 2.0 Array)   1437837_x_at (Mouse Genome 430 2.0 Array)   1440022_at (Mouse Genome 430 2.0 Array)   1452709_at (Mouse Genome 430 2.0 Array)   1455788_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000054548
Ensembl peptide - ENSMUSP00000097944
Ensembl peptide - ENSMUSP00000120859
NCBI entrez gene - 73826     See in Manteia.
MGI - MGI:1921076
RefSeq - XM_006521485
RefSeq - NM_001347082
RefSeq - NM_178627
RefSeq Peptide - NP_001334011
RefSeq Peptide - NP_848742
swissprot - Q3UDD3
swissprot - Q8BG81
swissprot - F6VR84
Ensembl - ENSMUSG00000041815
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poldip3ENSDARG00000099375Danio rerio
 POLDIP3ENSGALG00000011863Gallus gallus
 Q9BY77ENSG00000100227Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034784  PDIP3, RNA recognition motif
 IPR034785  Polymerase delta-interacting protein 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IDA
 biological_processGO:0045727 positive regulation of translation ISO
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000346 transcription export complex ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck ISO
 cellular_componentGO:0035145 exon-exon junction complex ISO
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000022774 Ncbp2 / Q9CQ49 / Nuclear cap-binding protein subunit 2 / P52298*  / complex
 ENSMUSG00000028330 Ncbp1 / Q3UYV9 / Nuclear cap-binding protein subunit 1 / Q09161*  / complex






 

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