ENSGALG00000011863


Gallus gallus

Features
Gene ID: ENSGALG00000011863
  
Biological name :POLDIP3
  
Synonyms : DNA polymerase delta interacting protein 3 / POLDIP3
  
Possible biological names infered from orthology : Mus musculus polymerase (DNA-directed), delta interacting protein 3 (Poldip3), transcript variant 2, mRNA. / Q8BG81 / Q9BY77
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 49207530
Gene end: 49221469
  
Corresponding Affymetrix probe sets: Gga.13560.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019330
NCBI entrez gene - 417974     See in Manteia.
RefSeq - NM_001012814
RefSeq - XM_015285045
RefSeq Peptide - NP_001012832
swissprot - Q5F4B6
Ensembl - ENSGALG00000011863
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poldip3ENSDARG00000099375Danio rerio
 Q9BY77ENSG00000100227Homo sapiens
 Q8BG81ENSMUSG00000041815Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002087 NCBP1 / Q5ZJZ6 / Nuclear cap-binding protein subunit 1 / Q09161* / Q3UYV9*  / complex
 ENSGALG00000006843 NCBP2 / A6PVI3* / NCBP2L* / P52298* / Q9CQ49* / nuclear cap binding protein subunit 2* / nuclear cap binding protein subunit 2 like*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr