ENSG00000100299


Homo sapiens

Features
Gene ID: ENSG00000100299
  
Biological name :ARSA
  
Synonyms : ARSA / arylsulfatase A / P15289
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.33
Gene start: 50622754
Gene end: 50628173
  
Corresponding Affymetrix probe sets: 204443_at (Human Genome U133 Plus 2.0 Array)   236541_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000412542
Ensembl peptide - ENSP00000378983
Ensembl peptide - ENSP00000477013
Ensembl peptide - ENSP00000216124
Ensembl peptide - ENSP00000348406
Ensembl peptide - ENSP00000378981
NCBI entrez gene - 410     See in Manteia.
OMIM - 607574
RefSeq - XM_017028800
RefSeq - NM_000487
RefSeq - NM_001085425
RefSeq - NM_001085426
RefSeq - NM_001085427
RefSeq - NM_001085428
RefSeq - XM_011530690
RefSeq - XM_011530691
RefSeq Peptide - NP_001078895
RefSeq Peptide - NP_001078896
RefSeq Peptide - NP_001078897
RefSeq Peptide - NP_000478
RefSeq Peptide - NP_001078894
swissprot - A0A0C4DFZ2
swissprot - P15289
swissprot - V9GYR0
Ensembl - ENSG00000100299
  
Related genetic diseases (OMIM): 250100 - Metachromatic leukodystrophy, 250100
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arsaENSDARG00000042270Danio rerio
 ARSAENSGALG00000035824Gallus gallus
 ArsaENSMUSG00000022620Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARSG / Q96EG1 / arylsulfatase GENSG0000014133737
GALNS / P34059 / galactosamine (N-acetyl)-6-sulfataseENSG0000014101236
STS / P08842 / steroid sulfataseENSG0000010184635
ARSE / P51690 / arylsulfatase E (chondrodysplasia punctata 1)ENSG0000015739933
ARSF / P54793 / arylsulfatase FENSG0000006209633
ARSD / P51689 / arylsulfatase DENSG0000000675633
ARSH / Q5FYA8 / arylsulfatase family member HENSG0000020566733
ARSB / P15848 / arylsulfatase BENSG0000011327326
ARSI / Q5FYB1 / arylsulfatase family member IENSG0000018387626
ARSJ / Q5FYB0 / arylsulfatase family member JENSG0000018080124


Protein motifs (from Interpro)
Interpro ID Name
 IPR000917  Sulfatase, N-terminal
 IPR017849  Alkaline phosphatase-like, alpha/beta/alpha
 IPR017850  Alkaline-phosphatase-like, core domain superfamily
 IPR024607  Sulfatase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006687 glycosphingolipid metabolic process TAS
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0007339 binding of sperm to zona pellucida IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0007584 response to nutrient IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009268 response to pH IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0043627 response to estrogen IEA
 biological_processGO:0043687 post-translational protein modification TAS
 biological_processGO:0045471 response to ethanol IEA
 biological_processGO:0051597 response to methylmercury IEA
 cellular_componentGO:0001669 acrosomal vesicle IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome TAS
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031232 extrinsic component of external side of plasma membrane IEA
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004065 arylsulfatase activity TAS
 molecular_functionGO:0004098 cerebroside-sulfatase activity TAS
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008484 sulfuric ester hydrolase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
The activation of arylsulfatases
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000648 Optic atrophy 
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 HP:0000649 Abnormality of vision evoked potentials 
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 HP:0000712 Emotional lability 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0000736 Short attention span "Reduced attention span characterized by distractibility and impulsivity but not necessarily satisfying the diagnostic criteria for attention deficit hyperactivity disorder." [HPO:curators]
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 HP:0000738 Hallucinations 
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 HP:0000746 Delusions 
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 HP:0000762 Decreased nerve conduction velocities 
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 HP:0001082 Cholecystitis 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001268 Mental deterioration 
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 HP:0001283 Bulbar palsy "Bulbar weakness (or bulbar palsy) refers to bilateral impairment of function of the lower cranial nerves IX, X, XI and XII, which occurs due to lower motor neuron lesion either at nuclear or fascicular level in the medulla or from bilateral lesions of the lower cranial nerves outside the brain-stem. Bulbar weakness is often associated with difficulty in chewing, weakness of the facial muscles, dysarthria, palatal weakness and regurgitation of fluids, dysphagia, and dysphonia." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002080 Intention tremor "An oscillatory cerebellar ataxia that tends to be absent when the limbs are inactive and during the first part of voluntary movement but worsening as the movement continues and greater precision is required (e.g., in touching a target such as the patient s nose or a physician s finger)." [HPO:curators]
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 HP:0002312 Clumsiness 
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 HP:0002354 Memory impairment 
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 HP:0002355 Difficulty walking 
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 HP:0002359 Frequent falls 
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 HP:0002371 Loss of speech 
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 HP:0002376 Developmental regression 
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 HP:0002415 Leukodystrophy 
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 HP:0002445 Tetraplegia 
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 HP:0002478 Progressive spastic quadriplegia 
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 HP:0002483 Bulbar signs 
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 HP:0002500 Abnormality of the cerebral white matter 
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0002607 Bowel incontinence 
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 HP:0002922 Increased CSF protein 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0003444 EMG shows chronic denervation 
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 HP:0003445 EMG shows neuropathic changes 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0004343 Abnormality of glycosphingolipid metabolism 
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 HP:0004355 Abnormality of proteoglycan metabolism 
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 HP:0004926 Orthostatic hypotension due to autonomic dysfunction 
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 HP:0005609 Gallbladder dysfunction 
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 HP:0007133 Progressive peripheral neuropathy 
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 HP:0007240 Progressive gait ataxia 
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 HP:0007272 Progressive psychomotor deterioration 
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 HP:0007663 Decreased central vision 
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 HP:0008619 Hearing loss, sensorineural, bilateral 
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 HP:0008872 Feeding problems in infancy 
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 HP:0011096 Peripheral demyelination "A loss of myelin from the internode regions along myelinated nerve fibers of the peripheral nervous system." [HPO:probinson]
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 HP:0012433 Abnormal social behavior "An abnormality of actions or reactions of a person taking place during interactions with others." [HPO:probinson]
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 HP:0025013 Decerebrate rigidity "A type of rigidity that is manifested by an exaggerated extensor posture of all extremities." [UToronto:chum]
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 HP:0030081 Punctate periventricular T2 hyperintense foci "Multiple pointlike areas of high T2 signal observed upon magnetic resonance imaging of the periventricular cerebral white matter." []
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 HP:0031358 Vegetative state "Absence of wakefulness and conscience, but (in contrast to coma) with involuntary opening of the eyes and movements (such as teeth grinding, yawning, or thrashing of the extremities)." []
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 HP:0040083 Toe walking 
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 HP:0100575 Neoplasm of the gallbladder "The presence of a `neoplasm` (MPATH:218) of the `gallbladder` (FMA:7202)." [HPO:probinson]
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 HP:0100753 Schizophrenia "A mental disorder characterized by a disintegration of thought processes and of emotional responsiveness. It most commonly manifests as auditory hallucinations, paranoid or bizarre delusions, or disorganized speech and thinking, and it is accompanied by significant social or occupational dysfunction. The onset of symptoms typically occurs in young adulthood, with a global lifetime prevalence of about 0.3-0.7%." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100299 ARSA / P15289 / arylsulfatase A  / complex






 

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