ENSG00000100815


Homo sapiens

Features
Gene ID: ENSG00000100815
  
Biological name :TRIP11
  
Synonyms : Q15643 / thyroid hormone receptor interactor 11 / TRIP11
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q32.12
Gene start: 91965991
Gene end: 92040896
  
Corresponding Affymetrix probe sets: 209778_at (Human Genome U133 Plus 2.0 Array)   210760_x_at (Human Genome U133 Plus 2.0 Array)   230211_at (Human Genome U133 Plus 2.0 Array)   236160_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000267622
Ensembl peptide - ENSP00000451032
Ensembl peptide - ENSP00000451607
Ensembl peptide - ENSP00000451944
NCBI entrez gene - 9321     See in Manteia.
OMIM - 604505
RefSeq - XM_017021788
RefSeq - NM_001321851
RefSeq - NM_004239
RefSeq - XM_017021787
RefSeq Peptide - NP_001308780
RefSeq Peptide - NP_004230
swissprot - G3V4R7
swissprot - H0YJ97
swissprot - H0YJI2
swissprot - Q15643
Ensembl - ENSG00000100815
  
Related genetic diseases (OMIM): 200600 - Achondrogenesis, type IA, 200600
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trip11ENSDARG00000078381Danio rerio
 TRIP11ENSGALG00000010763Gallus gallus
 Trip11ENSMUSG00000021188Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000237  GRIP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003281 ventricular septum development IEA
 biological_processGO:0003413 chondrocyte differentiation involved in endochondral bone morphogenesis IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0035735 intraciliary transport involved in cilium assembly TAS
 biological_processGO:0060122 inner ear receptor cell stereocilium organization IEA
 biological_processGO:0060348 bone development IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0002079 inner acrosomal membrane IEA
 cellular_componentGO:0002080 acrosomal membrane IEA
 cellular_componentGO:0002081 outer acrosomal membrane IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005801 cis-Golgi network IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0030133 transport vesicle TAS
 molecular_functionGO:0003713 transcription coactivator activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Intraflagellar transport
Intra-Golgi traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000470 Short neck 
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 HP:0000474 Excess nuchal skin 
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 HP:0000476 Cystic hygroma of the neck "A cystic lymphatic lesion of the neck." [HPO:curators]
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0000882 Hypoplastic scapulae 
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 HP:0000894 Short clavicles 
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 HP:0000916 Broad clavicles "Increased breadth of the clavicles." [HPO:curators]
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 HP:0000923 Beaded ribs "The presence of a row of beadlike prominences at the junction of a rib and its cartilag." [HPO:curators]
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001538 Protuberant abdomen "A thrusting or bulging out of the abdomen." [HPO:curators]
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 HP:0001552 Barrel-shaped chest 
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 HP:0001561 Polyhydramnios 
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001789 Hydrops fetalis 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002983 Micromelia 
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 HP:0002984 Hypoplasia of the radius "Underdevelopment of the radius." [HPO:curators]
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 HP:0003175 Hypoplastic ischia 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0003336 Arrest of endochondral ring structures with persistence of circumferential growth 
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0003521 Short stature, disproportionate (short trunk) 
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 HP:0003826 Stillborn or neonatal death 
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 HP:0004279 Hypoplastic hand 
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 HP:0004331 Decreased skull ossification "A reduction in the magnitude or amount of ossification of the skull." [HPO:curators]
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 HP:0004606 Unossified vertebral bodies 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005716 Lethal skeletal dysplasia 
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 HP:0006489 Abnormality of the femoral metaphysis 
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 HP:0006640 Multiple rib fractures 
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 HP:0006703 Aplasia/Hypoplasia of the lungs 
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 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
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 HP:0010660 Abnormality of the mineralisation and ossification of bones of the hand 
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 HP:0010675 Abnormality of the mineralisation and ossification of bones of the feet 
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0100541 Femoral hernia "A hernia which occurs just below the inguinal ligament, where abdominal contents pass through a naturally occurring weakness called the femoral canal." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000143761 ARF1 / P84077 / ADP ribosylation factor 1  / complex / reaction
 ENSG00000109083 IFT20 / Q8IY31 / intraflagellar transport 20  / complex






 

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