ENSG00000106105


Homo sapiens

Features
Gene ID: ENSG00000106105
  
Biological name :GARS
  
Synonyms : GARS / glycyl-tRNA synthetase / P41250
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: p14.3
Gene start: 30594681
Gene end: 30634033
  
Corresponding Affymetrix probe sets: 208693_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000373918
Ensembl peptide - ENSP00000392677
Ensembl peptide - ENSP00000415447
Ensembl peptide - ENSP00000485931
NCBI entrez gene - 2617     See in Manteia.
OMIM - 600287
RefSeq - XM_006715686
RefSeq - NM_001316772
RefSeq - NM_002047
RefSeq Peptide - NP_001303701
RefSeq Peptide - NP_002038
swissprot - F8WCK4
swissprot - H7C443
swissprot - P41250
Ensembl - ENSG00000106105
  
Related genetic diseases (OMIM): 600794 - Neuropathy, distal hereditary motor, type VA, 600794
  601472 - Charcot-Marie-Tooth disease, type 2D, 601472
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 garsENSDARG00000059070Danio rerio
 GARSENSGALG00000005694Gallus gallus
 GarsENSMUSG00000029777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000738  WHEP-TRS domain
 IPR002314  Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
 IPR002315  Glycyl-tRNA synthetase
 IPR004154  Anticodon-binding
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR009068  S15/NS1, RNA-binding
 IPR027031  Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2
 IPR033731  Glycyl-tRNA synthetase-like core domain
 IPR036621  Anticodon-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IMP
 biological_processGO:0006426 glycyl-tRNA aminoacylation IEA
 biological_processGO:0015966 diadenosine tetraphosphate biosynthetic process IDA
 biological_processGO:0070150 mitochondrial glycyl-tRNA aminoacylation IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0030141 secretory granule IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0070062 extracellular exosome ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004081 bis(5"-nucleosyl)-tetraphosphatase (asymmetrical) activity IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004820 glycine-tRNA ligase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046983 protein dimerization activity IDA


Pathways (from Reactome)
Pathway description
Cytosolic tRNA aminoacylation
Mitochondrial tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001765 Hammer toes 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002936 Distal sensory impairment 
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 HP:0003392 First dorsal interossei muscle weakness 
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 HP:0003393 Thenar muscle atrophy 
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 HP:0003426 First dorsal interossei muscle atrophy 
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 HP:0003427 Thenar muscle weakness 
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 HP:0003435 Cold-induced hand cramps 
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 HP:0003484 Upper limb involvement may occur later 
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 HP:0003674 Age of onset 
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 HP:0003677 Slow progression 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0009129 Amyotrophy involving the upper limbs "Muscular atrophy involving the muscles of the upper limbs." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000106105 GARS / P41250 / glycyl-tRNA synthetase  / complex






 

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