ENSG00000107223


Homo sapiens

Features
Gene ID: ENSG00000107223
  
Biological name :EDF1
  
Synonyms : EDF1 / endothelial differentiation related factor 1 / O60869
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.3
Gene start: 136862119
Gene end: 136866286
  
Corresponding Affymetrix probe sets: 209058_at (Human Genome U133 Plus 2.0 Array)   209059_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000224073
Ensembl peptide - ENSP00000360711
Ensembl peptide - ENSP00000360712
NCBI entrez gene - 8721     See in Manteia.
OMIM - 605107
RefSeq - NM_003792
RefSeq - NM_001281297
RefSeq - NM_001281298
RefSeq - NM_001281299
RefSeq - NM_153200
RefSeq Peptide - NP_001268226
RefSeq Peptide - NP_001268227
RefSeq Peptide - NP_001268228
RefSeq Peptide - NP_003783
RefSeq Peptide - NP_694880
swissprot - O60869
Ensembl - ENSG00000107223
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 edf1ENSDARG00000009950Danio rerio
 EDF1ENSGALG00000038003Gallus gallus
 Edf1ENSMUSG00000015092Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001387  Cro/C1-type helix-turn-helix domain
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013729  Multiprotein bridging factor 1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated TAS
 biological_processGO:0007275 multicellular organism development TAS
 biological_processGO:0019216 regulation of lipid metabolic process TAS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043388 positive regulation of DNA binding IDA
 biological_processGO:0045446 endothelial cell differentiation TAS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated TAS
 cellular_componentGO:0005622 intracellular TAS
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005669 transcription factor TFIID complex IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IMP
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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