ENSMUSG00000015092


Mus musculus

Features
Gene ID: ENSMUSG00000015092
  
Biological name :Edf1
  
Synonyms : Edf1 / Endothelial differentiation-related factor 1 / Q9JMG1
  
Possible biological names infered from orthology : O60869
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: A3
Gene start: 25557847
Gene end: 25562082
  
Corresponding Affymetrix probe sets: 10470119 (MoGene1.0st)   1438503_x_at (Mouse Genome 430 2.0 Array)   1440151_s_at (Mouse Genome 430 2.0 Array)   1440152_x_at (Mouse Genome 430 2.0 Array)   1448266_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000015236
NCBI entrez gene - 59022     See in Manteia.
MGI - MGI:1891227
RefSeq - NM_021519
RefSeq - XM_006498208
RefSeq Peptide - NP_067494
swissprot - Q9JMG1
Ensembl - ENSMUSG00000015092
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 edf1ENSDARG00000009950Danio rerio
 EDF1ENSGALG00000038003Gallus gallus
 EDF1ENSG00000107223Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001387  Cro/C1-type helix-turn-helix domain
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013729  Multiprotein bridging factor 1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043388 positive regulation of DNA binding IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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