ENSG00000108651


Homo sapiens

Features
Gene ID: ENSG00000108651
  
Biological name :UTP6
  
Synonyms : Q9NYH9 / UTP6 / UTP6, small subunit processome component
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q11.2
Gene start: 31860899
Gene end: 31901765
  
Corresponding Affymetrix probe sets: 218715_at (Human Genome U133 Plus 2.0 Array)   241025_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261708
Ensembl peptide - ENSP00000462135
Ensembl peptide - ENSP00000464599
NCBI entrez gene - 55813     See in Manteia.
RefSeq - XM_017024845
RefSeq - NM_018428
RefSeq - XM_005258012
RefSeq - XM_011524997
RefSeq Peptide - NP_060898
swissprot - Q9NYH9
swissprot - J3QSA7
swissprot - J3KRR8
Ensembl - ENSG00000108651
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp6ENSDARG00000098433Danio rerio
 UTP6ENSGALG00000003260Gallus gallus
 Utp6ENSMUSG00000035575Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003107  HAT (Half-A-TPR) repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013949  U3 small nucleolar RNA-associated protein 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030515 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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