ENSGALG00000003260


Gallus gallus

Features
Gene ID: ENSGALG00000003260
  
Biological name :UTP6
  
Synonyms : UTP6 / UTP6, small subunit processome component
  
Possible biological names infered from orthology : Q8VCY6 / Q9NYH9
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 6643046
Gene end: 6652817
  
Corresponding Affymetrix probe sets: Gga.17922.1.S1_at (Chicken Array)   Gga.2565.2.S1_s_at (Chicken Array)   GgaAffx.13037.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049204
Ensembl peptide - ENSGALP00000062990
Ensembl peptide - ENSGALP00000005153
NCBI entrez gene - 417405     See in Manteia.
RefSeq - NM_001006207
RefSeq Peptide - NP_001006207
swissprot - A0A1D5P905
swissprot - F1NLG7
swissprot - Q5ZI50
Ensembl - ENSGALG00000003260
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp6ENSDARG00000098433Danio rerio
 UTP6ENSG00000108651Homo sapiens
 Utp6ENSMUSG00000035575Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003107  HAT (Half-A-TPR) repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013949  U3 small nucleolar RNA-associated protein 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA
 molecular_functionGO:0030515 snoRNA binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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