ENSG00000109956


Homo sapiens

Features
Gene ID: ENSG00000109956
  
Biological name :B3GAT1
  
Synonyms : B3GAT1 / beta-1,3-glucuronyltransferase 1 / Q9P2W7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q25
Gene start: 134378504
Gene end: 134411918
  
Corresponding Affymetrix probe sets: 219521_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000307875
Ensembl peptide - ENSP00000376359
Ensembl peptide - ENSP00000433847
NCBI entrez gene - 27087     See in Manteia.
OMIM - 151290
RefSeq - XM_017017552
RefSeq - NM_018644
RefSeq - NM_054025
RefSeq - XM_011542753
RefSeq - XM_017017550
RefSeq - XM_017017551
RefSeq - XM_005271506
RefSeq - XM_011542751
RefSeq Peptide - NP_473366
RefSeq Peptide - NP_061114
swissprot - Q9P2W7
Ensembl - ENSG00000109956
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 b3gat1aENSDARG00000040547Danio rerio
 B3GAT1ENSGALG00000001611Gallus gallus
 B3gat1ENSMUSG00000045994Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B3GAT2 / Q9NPZ5 / beta-1,3-glucuronyltransferase 2ENSG0000011230945
B3GAT3 / O94766 / beta-1,3-glucuronyltransferase 3ENSG0000014954144


Protein motifs (from Interpro)
Interpro ID Name
 IPR005027  Glycosyl transferase, family 43
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process TAS
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0030203 glycosaminoglycan metabolic process TAS
 biological_processGO:0030204 chondroitin sulfate metabolic process IBA
 biological_processGO:0050650 chondroitin sulfate proteoglycan biosynthetic process IBA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0008499 UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
 molecular_functionGO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000109956 B3GAT1 / Q9P2W7 / beta-1,3-glucuronyltransferase 1  / complex






 

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