ENSGALG00000001611


Gallus gallus

Features
Gene ID: ENSGALG00000001611
  
Biological name :B3GAT1
  
Synonyms : B3GAT1 / beta-1,3-glucuronyltransferase 1
  
Possible biological names infered from orthology : Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 / Q9CW73 / Q9P2W7
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 2590102
Gene end: 2619976
  
Corresponding Affymetrix probe sets: Gga.30.2.S1_a_at (Chicken Array)   GgaAffx.20262.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000033857
NCBI entrez gene - 373949     See in Manteia.
RefSeq - XM_015297928
RefSeq - NM_001277839
RefSeq - XM_015297926
RefSeq - XM_015297927
RefSeq - XM_015297923
RefSeq - XM_015297924
RefSeq - XM_015297925
RefSeq Peptide - NP_001264768
swissprot - F1NH16
Ensembl - ENSGALG00000001611
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 b3gat1aENSDARG00000040547Danio rerio
 B3GAT1ENSG00000109956Homo sapiens
 B3gat1ENSMUSG00000045994Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B3GAT1LENSGALG0000001507565
B3GAT2 / galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 / P59270* / Q9NPZ5* / beta-1,3-glucuronyltransferase 2*ENSGALG0000003159045


Protein motifs (from Interpro)
Interpro ID Name
 IPR005027  Glycosyl transferase, family 43
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IBA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0030204 chondroitin sulfate metabolic process IBA
 biological_processGO:0050650 chondroitin sulfate proteoglycan biosynthetic process IBA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0008499 UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
 molecular_functionGO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001611 B3GAT1 / beta-1,3-glucuronyltransferase 1 / Q9CW73* / Q9P2W7* / Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 *  / complex






 

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