ENSG00000111364


Homo sapiens

Features
Gene ID: ENSG00000111364
  
Biological name :DDX55
  
Synonyms : DDX55 / DEAD-box helicase 55 / Q8NHQ9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q24.31
Gene start: 123602077
Gene end: 123620941
  
Corresponding Affymetrix probe sets: 231843_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000238146
Ensembl peptide - ENSP00000442823
Ensembl peptide - ENSP00000446255
Ensembl peptide - ENSP00000443114
Ensembl peptide - ENSP00000346244
Ensembl peptide - ENSP00000442332
NCBI entrez gene - 57696     See in Manteia.
RefSeq - XM_017019721
RefSeq - XM_017019714
RefSeq - XM_017019715
RefSeq - XM_017019716
RefSeq - XM_017019717
RefSeq - XM_017019718
RefSeq - XM_017019719
RefSeq - XM_017019720
RefSeq - NM_020936
RefSeq - XM_011538608
RefSeq - XM_017019710
RefSeq - XM_017019711
RefSeq - XM_017019712
RefSeq - XM_017019713
RefSeq Peptide - NP_065987
swissprot - F5H2I2
swissprot - F5H5U2
swissprot - E7EX41
swissprot - A0A024RBS0
swissprot - Q8NHQ9
swissprot - F5H735
Ensembl - ENSG00000111364
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx55ENSDARG00000009864Danio rerio
 DDX55ENSGALG00000003298Gallus gallus
 Ddx55ENSMUSG00000029389Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR025313  Domain of unknown function DUF4217
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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