ENSGALG00000003298


Gallus gallus

Features
Gene ID: ENSGALG00000003298
  
Biological name :DDX55
  
Synonyms : ATP-dependent RNA helicase DDX55 / DDX55
  
Possible biological names infered from orthology : DEAD-box helicase 55 / Q6ZPL9 / Q8NHQ9
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 4988119
Gene end: 4994687
  
Corresponding Affymetrix probe sets: GgaAffx.11799.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005215
NCBI entrez gene - 416820     See in Manteia.
RefSeq - NM_001006185
RefSeq Peptide - NP_001006185
swissprot - F1NJA0
Ensembl - ENSGALG00000003298
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx55ENSDARG00000009864Danio rerio
 DDX55ENSG00000111364Homo sapiens
 Ddx55ENSMUSG00000029389Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR025313  Domain of unknown function DUF4217
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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