ENSG00000111615


Homo sapiens

Features
Gene ID: ENSG00000111615
  
Biological name :KRR1
  
Synonyms : KRR1 / KRR1, small subunit processome component homolog / Q13601
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q21.2
Gene start: 75490861
Gene end: 75511636
  
Corresponding Affymetrix probe sets: 203202_at (Human Genome U133 Plus 2.0 Array)   203203_s_at (Human Genome U133 Plus 2.0 Array)   232441_at (Human Genome U133 Plus 2.0 Array)   233515_at (Human Genome U133 Plus 2.0 Array)   235038_at (Human Genome U133 Plus 2.0 Array)   243930_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411740
Ensembl peptide - ENSP00000229214
NCBI entrez gene - 11103     See in Manteia.
OMIM - 612817
RefSeq - NM_007043
RefSeq Peptide - NP_008974
swissprot - Q13601
Ensembl - ENSG00000111615
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krr1ENSDARG00000011246Danio rerio
 KRR1ENSGALG00000010227Gallus gallus
 Krr1ENSMUSG00000063334Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR024166  Ribosomal RNA assembly KRR1
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0045171 intercellular bridge IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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