ENSGALG00000010227


Gallus gallus

Features
Gene ID: ENSGALG00000010227
  
Biological name :KRR1
  
Synonyms : KRR1 / KRR1, small subunit processome component homolog
  
Possible biological names infered from orthology : Q13601 / Q8BGA5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 37811564
Gene end: 37817029
  
Corresponding Affymetrix probe sets: GgaAffx.12247.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061556
Ensembl peptide - ENSGALP00000016606
NCBI entrez gene - 417863     See in Manteia.
RefSeq - XM_015281824
RefSeq - NM_001030744
RefSeq Peptide - NP_001025915
swissprot - A0A1L1RRX0
swissprot - F1N9P9
Ensembl - ENSGALG00000010227
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krr1ENSDARG00000011246Danio rerio
 KRR1ENSG00000111615Homo sapiens
 Krr1ENSMUSG00000063334Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR024166  Ribosomal RNA assembly KRR1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0045171 intercellular bridge IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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