ENSMUSG00000063334


Mus musculus

Features
Gene ID: ENSMUSG00000063334
  
Biological name :Krr1
  
Synonyms : Krr1 / KRR1 small subunit processome component homolog / Q8BGA5
  
Possible biological names infered from orthology : Q13601
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: D2
Gene start: 111972664
Gene end: 111988432
  
Corresponding Affymetrix probe sets: 10366350 (MoGene1.0st)   1420139_s_at (Mouse Genome 430 2.0 Array)   1428084_at (Mouse Genome 430 2.0 Array)   1444726_at (Mouse Genome 430 2.0 Array)   1452658_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000125746
Ensembl peptide - ENSMUSP00000134408
NCBI entrez gene - 52705     See in Manteia.
MGI - MGI:1289274
RefSeq - NM_178610
RefSeq Peptide - NP_848725
swissprot - G3UZA0
swissprot - Q8BGA5
Ensembl - ENSMUSG00000063334
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krr1ENSDARG00000011246Danio rerio
 KRR1ENSGALG00000010227Gallus gallus
 KRR1ENSG00000111615Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR024166  Ribosomal RNA assembly KRR1
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0045171 intercellular bridge IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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