ENSG00000111713


Homo sapiens

Features
Gene ID: ENSG00000111713
  
Biological name :GYS2
  
Synonyms : glycogen synthase 2 / GYS2 / P54840
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: p12.1
Gene start: 21536189
Gene end: 21604847
  
Corresponding Affymetrix probe sets: 214621_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261195
NCBI entrez gene - 2998     See in Manteia.
OMIM - 138571
RefSeq - NM_021957
RefSeq - XM_006719063
RefSeq Peptide - NP_068776
swissprot - P54840
Ensembl - ENSG00000111713
  
Related genetic diseases (OMIM): 240600 - Glycogen storage disease 0, liver, 240600
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gys2ENSDARG00000004904Danio rerio
 GYS2ENSGALG00000013265Gallus gallus
 Gys2ENSMUSG00000030244Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GYS1 / P13807 / glycogen synthase 1ENSG0000010481271


Protein motifs (from Interpro)
Interpro ID Name
 IPR008631  Glycogen synthase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005978 glycogen biosynthetic process TAS
 biological_processGO:0006091 generation of precursor metabolites and energy TAS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009749 response to glucose ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton ISS
 cellular_componentGO:0005938 cell cortex ISS
 cellular_componentGO:0030864 cortical actin cytoskeleton ISS
 cellular_componentGO:0043265 ectoplasm ISS
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004373 glycogen (starch) synthase activity EXP
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0042803 protein homodimerization activity TAS
 molecular_functionGO:0061547 glycogen synthase activity, transferring glucose-1-phosphate TAS


Pathways (from Reactome)
Pathway description
Glycogen synthesis
Myoclonic epilepsy of Lafora
Glycogen storage disease type 0 (liver GYS2)
Glycogen storage disease type IV (GBE1)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000737 Irritability 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001254 Lethargy 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001946 Ketosis 
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 HP:0001998 Neonatal hypoglycemia 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0002919 Ketonuria 
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 HP:0003076 Glycosuria "The excretion of abnormal amounts of glucose in the urine, generally resulting in osmotic diuresis." [HPO:curators]
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 HP:0003077 Hyperlipidemia 
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 HP:0003162 Fasting hypoglycemia 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0011024 Abnormality of the gastrointestinal tract "An abnormality of the `gastrointestinal tract` (FMA:71132)." [HPO:probinson]
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 HP:0011998 Postprandial hyperglycemia "An `increased concentration` (PATO:0001162) of `glucose` (CHEBI:17234) in the `blood` (FMA:9670) following a meal." [HPO:probinson]
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 HP:0012734 Ketotic hypoglycemia "Low blood glucose is accompanied by elevated levels of ketone bodies in the body." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000119938 Q9UQK1 / PPP1R3C / protein phosphatase 1 regulatory subunit 3C  / complex / reaction
 ENSG00000112425 EPM2A / O95278 / EPM2A, laforin glucan phosphatase  / reaction
 ENSG00000111713 GYS2 / P54840 / glycogen synthase 2  / complex
 ENSG00000056998 GYG2 / O15488 / glycogenin 2  / complex
 ENSG00000114480 GBE1 / Q04446 / 1,4-alpha-glucan branching enzyme 1  / reaction






 

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