ENSG00000112357


Homo sapiens

Features
Gene ID: ENSG00000112357
  
Biological name :PEX7
  
Synonyms : O00628 / peroxisomal biogenesis factor 7 / PEX7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q23.3
Gene start: 136822564
Gene end: 136913937
  
Corresponding Affymetrix probe sets: 205420_at (Human Genome U133 Plus 2.0 Array)   211033_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000315680
Ensembl peptide - ENSP00000356730
Ensembl peptide - ENSP00000441004
NCBI entrez gene - 5191     See in Manteia.
OMIM - 601757
RefSeq - XM_017010934
RefSeq - NM_000288
RefSeq - XM_005267019
RefSeq - XM_006715502
RefSeq Peptide - NP_000279
swissprot - Q6FGN1
swissprot - O00628
swissprot - Q5TDQ5
Ensembl - ENSG00000112357
  
Related genetic diseases (OMIM): 215100 - Rhizomelic chondrodysplasia punctata, type 1, 215100
  614879 - Peroxisome biogenesis disorder 9B, 614879
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pex7ENSDARG00000042553Danio rerio
 PEX7ENSGALG00000013874Gallus gallus
 Pex7ENSMUSG00000020003Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
WDR17 / Q8IZU2 / WD repeat domain 17ENSG0000015062719


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0001958 endochondral ossification IEA
 biological_processGO:0006625 protein targeting to peroxisome IEA
 biological_processGO:0006635 fatty acid beta-oxidation IEA
 biological_processGO:0007031 peroxisome organization IMP
 biological_processGO:0008611 ether lipid biosynthetic process IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016558 protein import into peroxisome matrix IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005782 peroxisomal matrix IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0005053 peroxisome matrix targeting signal-2 binding IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IDA


Pathways (from Reactome)
Pathway description
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000458 Anosmia "An inability to perceive odors. This is a general term describing inability to smell arising in any part of the process of smelling from absorption of odorants into the nasal mucous overlying the olfactory epithelium, diffusion to the cilia, binding to olfactory receptor sites, generation of action potentials in olfactory neurons, and perception of a smell." [HPO:curators]
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 HP:0000488 Retinopathy 
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 HP:0000505 Impaired vision 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
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 HP:0000529 Progressive visual loss 
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 HP:0000546 Retinal degeneration 
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000582 Upslanting palpebral fissures 
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 HP:0000616 Miosis 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000662 Night blindness 
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 HP:0000958 Dry skin 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001371 Contractures 
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 HP:0001525 Severe failure to thrive 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001638 Cardiomyopathy 
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 HP:0001640 Cardiomegaly 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001765 Hammer toes 
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 HP:0001939 Metabolism abnormality 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002164 Nail dysplasia 
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 HP:0002188 Delayed myelination 
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 HP:0002376 Developmental regression 
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 HP:0002652 Skeletal dysplasia 
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 HP:0002654 Multiple epiphyseal dysplasia 
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 HP:0002751 Kyphoscoliosis 
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 HP:0002922 Increased CSF protein 
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 HP:0003015 Metaphyseal flaring "The presence of splayed (i.e.,flared) metaphyseal segments of the long bones." [HPO:curators]
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003417 Coronal cleft vertebrae 
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 HP:0003474 Sensory impairment 
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0004374 Hemiplegia/hemiparesis "Loss of strength in the arm, leg, and sometimes face on one side of the body. Hemiplegia refers to a severe or complete loss of strength, whereas hemiparesis refers to a relatively mild loss of strength." [HPO:curators]
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 HP:0004689 short fourth metatarsals 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005841 Calcific stippling of infantile cartilaginous skeleton 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0007141 Sensorimotor neuropathy 
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 HP:0007256 Mild pyramidal signs 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008905 Rhizomelic short stature 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010571 Elevated levels of phytanic acid "An abnormal elevation of phytanic acid (3,7,11,15-tetramethyl hexadecanoic acid), which is a fatty acid that is derived from chlorophyll and present in the diet. The metabolism of phytanic acid involves alpha-oxidation in the peroxisome, which converts phytanic acid to pristanic acid." [HPO:curators]
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 HP:0010655 Stippling of the epiphyses "The presence of abnormal punctate (speckled, dot-like) calcifications in the epiphyses (FMA:24012)." [HPO:curators]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0012211 Abnormal renal physiology "Any functional anomaly of the `kidney` (FMA:7203)." [HPO:probinson]
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0012722 Heart block "Impaired conduction of cardiac impulse occurring anywhere along the conduction pathway." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000131508 P62837 / UBE2D2 / ubiquitin conjugating enzyme E2 D2  / complex / reaction
 ENSG00000109332 P61077 / UBE2D3 / ubiquitin conjugating enzyme E2 D3  / reaction / complex
 ENSG00000142655 PEX14 / O75381 / peroxisomal biogenesis factor 14  / complex / reaction
 ENSG00000162928 PEX13 / Q92968 / peroxisomal biogenesis factor 13  / complex / reaction
 ENSG00000127980 PEX1 / O43933 / peroxisomal biogenesis factor 1  / reaction / complex
 ENSG00000157911 PEX10 / O60683 / peroxisomal biogenesis factor 10  / reaction / complex
 ENSG00000124587 PEX6 / Q13608 / peroxisomal biogenesis factor 6  / complex / reaction
 ENSG00000107537 PHYH / O14832 / phytanoyl-CoA 2-hydroxylase  / complex / reaction
 ENSG00000086666 Q6FIF0 / ZFAND6 / zinc finger AN1-type containing 6  / reaction / complex
 ENSG00000139197 PEX5 / P50542 / peroxisomal biogenesis factor 5  / reaction / complex
 ENSG00000060971 ACAA1 / P09110 / acetyl-CoA acyltransferase 1  / complex / reaction
 ENSG00000215193 PEX26 / Q7Z412 / peroxisomal biogenesis factor 26  / complex / reaction
 ENSG00000018510 AGPS / O00116 / alkylglycerone phosphate synthase  / reaction / complex
 ENSG00000164751 PEX2 / P28328 / peroxisomal biogenesis factor 2  / reaction / complex
 ENSG00000108733 PEX12 / O00623 / peroxisomal biogenesis factor 12  / reaction / complex
 ENSG00000072401 P51668 / UBE2D1 / ubiquitin conjugating enzyme E2 D1  / reaction / complex






 

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