ENSG00000117280


Homo sapiens

Features
Gene ID: ENSG00000117280
  
Biological name :RAB29
  
Synonyms : O14966 / RAB29 / RAB29, member RAS oncogene family
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q32.1
Gene start: 205767986
Gene end: 205775460
  
Corresponding Affymetrix probe sets: 218699_at (Human Genome U133 Plus 2.0 Array)   218700_s_at (Human Genome U133 Plus 2.0 Array)   243777_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000416613
Ensembl peptide - ENSP00000402910
Ensembl peptide - ENSP00000431483
Ensembl peptide - ENSP00000235932
Ensembl peptide - ENSP00000356107
Ensembl peptide - ENSP00000389899
NCBI entrez gene - 8934     See in Manteia.
OMIM - 603949
RefSeq - XM_017002750
RefSeq - NM_001135662
RefSeq - NM_001135663
RefSeq - NM_001135664
RefSeq - NM_003929
RefSeq - XM_005245569
RefSeq - XM_005245570
RefSeq - XM_005245571
RefSeq - XM_006711605
RefSeq - XM_006711606
RefSeq - XM_017002748
RefSeq - XM_017002749
RefSeq Peptide - NP_001129134
RefSeq Peptide - NP_001129135
RefSeq Peptide - NP_001129136
RefSeq Peptide - NP_003920
swissprot - O14966
swissprot - Q6FGU7
swissprot - E9PL56
Ensembl - ENSG00000117280
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB29ENSGALG00000000712Gallus gallus
 Rab29ENSMUSG00000026433Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB32 / Q13637 / RAB32, member RAS oncogene familyENSG0000011850852
RAB38 / P57729 / RAB38, member RAS oncogene familyENSG0000012389251
RAB23 / Q9ULC3 / RAB23, member RAS oncogene familyENSG0000011221034
RAB7A / P51149 / RAB7A, member RAS oncogene familyENSG0000007578533
RAB9A / P51151 / RAB9A, member RAS oncogene familyENSG0000012359531
RAB9B / Q9NP90 / RAB9B, member RAS oncogene familyENSG0000012357031
RAB7B / Q96AH8 / RAB7B, member RAS oncogene familyENSG0000027660029


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030697  Ras-related protein Rab29/Rab38/Rab32


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001921 positive regulation of receptor recycling IMP
 biological_processGO:0007005 mitochondrion organization IMP
 biological_processGO:0007030 Golgi organization IMP
 biological_processGO:0007416 synapse assembly IMP
 biological_processGO:0009617 response to bacterium IDA
 biological_processGO:0010977 negative regulation of neuron projection development IDA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032438 melanosome organization IBA
 biological_processGO:0039694 viral RNA genome replication IMP
 biological_processGO:0042110 T cell activation IMP
 biological_processGO:0042147 retrograde transport, endosome to Golgi IMP
 biological_processGO:0050862 positive regulation of T cell receptor signaling pathway IMP
 biological_processGO:0072657 protein localization to membrane IMP
 biological_processGO:0090316 positive regulation of intracellular protein transport IMP
 biological_processGO:1901214 regulation of neuron death ISS
 biological_processGO:1903441 protein localization to ciliary membrane ISS
 biological_processGO:1905279 regulation of retrograde transport, endosome to Golgi IEA
 biological_processGO:1990967 multi-organism toxin transport IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005769 early endosome IDA
 cellular_componentGO:0005773 vacuole IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005801 cis-Golgi network IDA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0020003 symbiont-containing vacuole IDA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0042470 melanosome IBA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0055037 recycling endosome IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0097708 intracellular vesicle IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IDA
 molecular_functionGO:0017137 Rab GTPase binding IDA
 molecular_functionGO:0019003 GDP binding IDA
 molecular_functionGO:0019894 kinesin binding IPI
 molecular_functionGO:0070840 dynein complex binding IDA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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