ENSG00000121897


Homo sapiens

Features
Gene ID: ENSG00000121897
  
Biological name :LIAS
  
Synonyms : LIAS / lipoic acid synthetase / O43766
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: p14
Gene start: 39458587
Gene end: 39485109
  
Corresponding Affymetrix probe sets: 214045_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000371270
Ensembl peptide - ENSP00000340676
Ensembl peptide - ENSP00000425580
Ensembl peptide - ENSP00000492833
Ensembl peptide - ENSP00000492540
Ensembl peptide - ENSP00000492482
Ensembl peptide - ENSP00000492260
Ensembl peptide - ENSP00000492203
Ensembl peptide - ENSP00000492038
Ensembl peptide - ENSP00000491899
Ensembl peptide - ENSP00000491831
Ensembl peptide - ENSP00000491681
Ensembl peptide - ENSP00000491591
Ensembl peptide - ENSP00000491477
Ensembl peptide - ENSP00000491086
Ensembl peptide - ENSP00000491001
Ensembl peptide - ENSP00000261434
NCBI entrez gene - 11019     See in Manteia.
OMIM - 607031
RefSeq - NM_006859
RefSeq - NM_001278590
RefSeq - NM_001278591
RefSeq - NM_001278592
RefSeq - NM_194451
RefSeq - XM_006713990
RefSeq - XM_017007665
RefSeq - XM_017007666
RefSeq - XM_017007667
RefSeq Peptide - NP_001265520
RefSeq Peptide - NP_001265521
RefSeq Peptide - NP_919433
RefSeq Peptide - NP_006850
RefSeq Peptide - NP_001265519
swissprot - O43766
swissprot - A0A024R9W0
swissprot - Q6P5Q6
swissprot - D6RCP8
swissprot - B4E0L7
swissprot - A0A1X7SBR7
swissprot - A0A1W2PRE7
swissprot - A0A1W2PRD2
swissprot - A0A1W2PR81
swissprot - A0A1W2PR40
swissprot - A0A1W2PQE9
swissprot - A0A1W2PQS9
swissprot - A0A1W2PQ87
swissprot - A0A1W2PQ02
swissprot - A0A1W2PPM2
swissprot - A0A1W2PNQ5
Ensembl - ENSG00000121897
  
Related genetic diseases (OMIM): 614462 - Hyperglycinemia, lactic acidosis, and seizures, 614462
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 liasENSDARG00000022845Danio rerio
 ENSGALG00000014312Gallus gallus
 ENSGALG00000031933Gallus gallus
 LiasENSMUSG00000029199Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003698  Lipoyl synthase
 IPR006638  Elp3/MiaB/NifB
 IPR007197  Radical SAM
 IPR013785  Aldolase-type TIM barrel
 IPR023404  Radical SAM, alpha/beta horseshoe
 IPR031691  Lipoyl synthase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0006954 inflammatory response ISS
 biological_processGO:0006979 response to oxidative stress ISS
 biological_processGO:0009107 lipoate biosynthetic process IEA
 biological_processGO:0009249 protein lipoylation IBA
 biological_processGO:0032496 response to lipopolysaccharide ISS
 biological_processGO:0034641 cellular nitrogen compound metabolic process TAS
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016783 sulfurtransferase activity IEA
 molecular_functionGO:0016992 lipoate synthase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
Glyoxylate metabolism and glycine degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001270 Motor retardation 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001510 Growth retardation 
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0002059 Cerebral atrophy 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002415 Leukodystrophy 
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012736 Profound global developmental delay "A profound delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000140905 GCSH / P23434 / glycine cleavage system protein H  / reaction






 

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