ENSG00000124827


Homo sapiens

Features
Gene ID: ENSG00000124827
  
Biological name :GCM2
  
Synonyms : GCM2 / glial cells missing homolog 2 / O75603
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p24.2
Gene start: 10873223
Gene end: 10881941
  
Corresponding Affymetrix probe sets: 220799_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000368805
NCBI entrez gene - 9247     See in Manteia.
OMIM - 603716
RefSeq - NM_004752
RefSeq Peptide - NP_004743
swissprot - O75603
Ensembl - ENSG00000124827
  
Related genetic diseases (OMIM): 146200 - Hypoparathyroidism, familial isolated, 146200
  617343 - Hyperparathyroidism 4, 617343

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gcm2ENSDARG00000045413Danio rerio
 GCM2ENSGALG00000012768Gallus gallus
 Gcm2ENSMUSG00000021362Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GCM1 / Q9NP62 / glial cells missing homolog 1ENSG0000013727027


Protein motifs (from Interpro)
Interpro ID Name
 IPR003902  Transcription regulator GCM domain
 IPR036115  GCM domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IMP
 biological_processGO:0006874 cellular calcium ion homeostasis IMP
 biological_processGO:0007275 multicellular organism development NAS
 biological_processGO:0030643 cellular phosphate ion homeostasis IMP
 biological_processGO:0042063 gliogenesis IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060017 parathyroid gland development IMP
 biological_processGO:0060706 cell differentiation involved in embryonic placenta development IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IMP
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IMP
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000121 Nephrocalcinosis 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000787 Kidney stones 
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 HP:0000829 Hypoparathyroidism 
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 HP:0000934 Chondrocalcinosis 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001281 Tetany 
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 HP:0002148 Hypophosphatemia "A lower than normal level of blood phosphate." [HPO:curators]
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 HP:0002150 Hypercalciuria 
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 HP:0002199 Seizures due to hypocalcemia 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0002897 Parathyroid adenoma 
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 HP:0002901 Hypocalcemia "A level of blood calcium that is lower than normal." [HPO:curators]
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 HP:0002905 Hyperphosphatemia 
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 HP:0002917 Hypomagnesemia 
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 HP:0003072 Hypercalcemia "A level of blood calcium that is higher than normal." [HPO:curators]
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 HP:0003109 Hyperphosphaturia "An increased excretion of phosphates in the urine." [HPO:curators]
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 HP:0003165 Elevated serum parathyroid hormone (PTH) level 
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 HP:0003251 Male infertility 
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 HP:0006780 Parathyroid carcinoma 
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 HP:0008198 Congenital hypoparathyroidism 
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 HP:0008200 Primary hyperparathyroidism 
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 HP:0008211 Parathyroid absence 
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 HP:0008250 Infantile hypercalcemia 
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 HP:0011458 Abdominal symptom 
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 HP:0040160 Generalized osteoporosis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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