ENSG00000125775


Homo sapiens

Features
Gene ID: ENSG00000125775
  
Biological name :SDCBP2
  
Synonyms : Q9H190 / SDCBP2 / syndecan binding protein 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p13
Gene start: 1309909
Gene end: 1329239
  
Corresponding Affymetrix probe sets: 233565_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000342935
Ensembl peptide - ENSP00000354013
Ensembl peptide - ENSP00000371229
Ensembl peptide - ENSP00000371233
NCBI entrez gene - 27111     See in Manteia.
OMIM - 617358
RefSeq - NM_001199784
RefSeq - NM_015685
RefSeq - NM_080489
RefSeq Peptide - NP_001186713
RefSeq Peptide - NP_056500
RefSeq Peptide - NP_536737
swissprot - Q9H190
Ensembl - ENSG00000125775
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdcbp2ENSDARG00000012513Danio rerio
 SDCBP2ENSGALG00000028347Gallus gallus
 Q99JZ0ENSMUSG00000027456Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SDCBP / O00560 / syndecan binding proteinENSG0000013757559


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development NAS
 biological_processGO:0008283 cell proliferation IMP
 biological_processGO:0035556 intracellular signal transduction NAS
 biological_processGO:0046907 intracellular transport NAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IDA
 molecular_functionGO:0008022 protein C-terminus binding IPI
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046982 protein heterodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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