ENSMUSG00000027456


Mus musculus

Features
Gene ID: ENSMUSG00000027456
  
Biological name :Sdcbp2
  
Synonyms : Q99JZ0 / Sdcbp2 / Syntenin-2
  
Possible biological names infered from orthology : Q9H190 / syndecan binding protein 2
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: G3
Gene start: 151572622
Gene end: 151590005
  
Corresponding Affymetrix probe sets: 10477022 (MoGene1.0st)   1424090_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028950
NCBI entrez gene - 228765     See in Manteia.
MGI - MGI:2385156
RefSeq - XM_006499305
RefSeq - NM_145535
RefSeq - XM_006499304
RefSeq Peptide - NP_663510
swissprot - Q99JZ0
Ensembl - ENSMUSG00000027456
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdcbp2ENSDARG00000012513Danio rerio
 SDCBP2ENSGALG00000028347Gallus gallus
 Q9H190ENSG00000125775Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sdcbp / O08992 / syndecan binding protein / O00560*ENSMUSG0000002824959


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008283 cell proliferation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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