ENSG00000130338


Homo sapiens

Features
Gene ID: ENSG00000130338
  
Biological name :TULP4
  
Synonyms : Q9NRJ4 / tubby like protein 4 / TULP4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q25.3
Gene start: 158232236
Gene end: 158511828
  
Corresponding Affymetrix probe sets: 218184_at (Human Genome U133 Plus 2.0 Array)   224170_s_at (Human Genome U133 Plus 2.0 Array)   239742_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000481804
Ensembl peptide - ENSP00000356061
Ensembl peptide - ENSP00000356064
NCBI entrez gene - 56995     See in Manteia.
RefSeq - XM_017011071
RefSeq - NM_001007466
RefSeq - NM_020245
RefSeq - XM_017011067
RefSeq - XM_017011068
RefSeq - XM_017011069
RefSeq - XM_017011070
RefSeq - XM_011535946
RefSeq - XM_017011063
RefSeq - XM_017011064
RefSeq - XM_017011065
RefSeq - XM_017011066
RefSeq Peptide - NP_001007467
RefSeq Peptide - NP_064630
swissprot - Q9NRJ4
swissprot - A0A087WYH3
Ensembl - ENSG00000130338
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tulp4aENSDARG00000045911Danio rerio
 tulp4bENSDARG00000063056Danio rerio
 TULP4ENSGALG00000037377Gallus gallus
 Tulp4ENSMUSG00000034377Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
WDR35 / Q9P2L0 / WD repeat domain 35ENSG000001189659
TULP3 / O75386 / tubby like protein 3ENSG000000782468
TULP1 / O00294 / tubby like protein 1ENSG000001120418
TUB / P50607 / tubby bipartite transcription factorENSG000001664028
TULP2 / O00295 / tubby like protein 2ENSG000001048048


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR001496  SOCS box domain
 IPR001680  WD40 repeat
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR025659  Tubby-like, C-terminal
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043687 post-translational protein modification TAS
 biological_processGO:0061512 protein localization to cilium IBA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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