ENSMUSG00000034377


Mus musculus

Features
Gene ID: ENSMUSG00000034377
  
Biological name :Tulp4
  
Synonyms : Q9JIL5 / tubby like protein 4 / Tulp4
  
Possible biological names infered from orthology : Q9NRJ4
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: A1
Gene start: 6106437
Gene end: 6251128
  
Corresponding Affymetrix probe sets: 10441494 (MoGene1.0st)   10441497 (MoGene1.0st)   1434585_at (Mouse Genome 430 2.0 Array)   1440282_at (Mouse Genome 430 2.0 Array)   1448548_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000049248
Ensembl peptide - ENSMUSP00000120358
Ensembl peptide - ENSMUSP00000123119
Ensembl peptide - ENSMUSP00000123218
NCBI entrez gene - 68842     See in Manteia.
MGI - MGI:1916092
RefSeq - XM_006523252
RefSeq - NM_054040
RefSeq - XM_006523247
RefSeq - XM_006523248
RefSeq - XM_006523249
RefSeq - XM_006523250
RefSeq - XM_006523251
RefSeq - NM_001103181
RefSeq Peptide - NP_001096651
RefSeq Peptide - NP_473381
swissprot - F6UMF8
swissprot - Q9JIL5
swissprot - D3Z003
swissprot - Q3UH13
Ensembl - ENSMUSG00000034377
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tulp4aENSDARG00000045911Danio rerio
 tulp4bENSDARG00000063056Danio rerio
 TULP4ENSGALG00000037377Gallus gallus
 TULP4ENSG00000130338Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Wdr35 / Q8BND3 / WD repeat domain 35 / Q9P2L0*ENSMUSG000000666439
Tulp3 / O88413 / tubby-like protein 3 / O75386*ENSMUSG000000015218
Tub / P50586 / tubby bipartite transcription factor / P50607*ENSMUSG000000310288
Tulp2 / P46686 / tubby-like protein 2 / O00295*ENSMUSG000000234678
Tulp1 / Q9Z273 / tubby like protein 1 / O00294*ENSMUSG000000374468


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR001496  SOCS box domain
 IPR001680  WD40 repeat
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR025659  Tubby-like, C-terminal
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0061512 protein localization to cilium IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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