ENSDARG00000045911


Danio rerio

Features
Gene ID: ENSDARG00000045911
  
Biological name :tulp4a
  
Synonyms : tubby like protein 4a / tulp4a
  
Possible biological names infered from orthology : Q9JIL5 / Q9NRJ4 / tubby like protein 4 / TULP4
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 331351
Gene end: 353924
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067485
Ensembl peptide - ENSDARP00000118167
NCBI entrez gene - 557730     See in Manteia.
RefSeq - NM_001045095
RefSeq Peptide - NP_001038560
swissprot - F6NJC6
swissprot - E7EXF2
ZFIN ID - ZDB-GENE-060503-215
Ensembl - ENSDARG00000045911
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TULP4ENSGALG00000037377Gallus gallus
 TULP4ENSG00000130338Homo sapiens
 Tulp4ENSMUSG00000034377Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tulp4b / tubby like protein 4b / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000006305669
wdr35 / WD repeat domain 35 / Q8BND3* / Q9P2L0*ENSDARG000000692698
zmp:0000000711 / TULP3* / O75386* / tubby like protein 3*ENSDARG000000636727
tub / tubby bipartite transcription factor / P50586* / P50607*ENSDARG000000621657
tulp1a / tubby like protein 1a / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG000000752956
si:dkey-220f10.4 / TULP2* / O00295* / P46686* / tubby like protein 2*ENSDARG000000629026
tulp1b / tubby like protein 1b / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG000000782106


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR001496  SOCS box domain
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR025659  Tubby-like, C-terminal
 IPR027267  AH/BAR domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0061512 protein localization to cilium IBA
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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