ENSDARG00000078210


Danio rerio

Features
Gene ID: ENSDARG00000078210
  
Biological name :tulp1b
  
Synonyms : tubby like protein 1b / tulp1b
  
Possible biological names infered from orthology : O00294 / Q9Z273 / tubby like protein 1 / TULP1
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 54538948
Gene end: 54562508
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124333
Ensembl peptide - ENSDARP00000132292
swissprot - A0A0R4IEZ1
swissprot - F8W3P9
ZFIN ID - ZDB-GENE-110411-113
Ensembl - ENSDARG00000078210
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TULP1ENSGALG00000031301Gallus gallus
 TULP1ENSG00000112041Homo sapiens
 Tulp1ENSMUSG00000037446Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tulp1a / tubby like protein 1a / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG0000007529570
tub / tubby bipartite transcription factor / P50586* / P50607*ENSDARG0000006216541
zmp:0000000711 / TULP3* / O75386* / tubby like protein 3*ENSDARG0000006367240
si:dkey-220f10.4 / TULP2* / O00295* / P46686* / tubby like protein 2*ENSDARG0000006290238
tulp4b / tubby like protein 4b / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000006305620
tulp4a / tubby like protein 4a / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000004591120
wdr35 / WD repeat domain 35 / Q8BND3* / Q9P2L0*ENSDARG0000006926917


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR018066  Tubby, C-terminal, conserved site
 IPR025659  Tubby-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0097500 receptor localization to non-motile cilium IBA
 biological_processGO:1903546 protein localization to photoreceptor outer segment IBA
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr