ENSGALG00000031301


Gallus gallus

Features
Gene ID: ENSGALG00000031301
  
Biological name :TULP1
  
Synonyms : Tubby-related protein 1 / TULP1
  
Possible biological names infered from orthology : O00294 / Q9Z273 / tubby like protein 1
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 60002
Gene end: 63740
  
Corresponding Affymetrix probe sets: Gga.951.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054620
NCBI entrez gene - 395321     See in Manteia.
RefSeq - NM_204615
RefSeq Peptide - NP_989946
swissprot - A0A1D5PP24
Ensembl - ENSGALG00000031301
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tulp1aENSDARG00000075295Danio rerio
 tulp1bENSDARG00000078210Danio rerio
 TULP1ENSG00000112041Homo sapiens
 Tulp1ENSMUSG00000037446Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TUB / tubby bipartite transcription factor / P50586* / P50607*ENSGALG0000000598661
TULP3 / tubby like protein 3 / O75386* / O88413*ENSGALG0000001342456
TULP4 / tubby like protein 4 / Q9JIL5* / Q9NRJ4*ENSGALG0000003737727
WDR35* / Q8BND3* / Q9P2L0* / WD repeat domain 35*ENSGALG0000001647716
WDR35* / Q8BND3* / Q9P2L0* / WD repeat domain 35*ENSGALG000000385443


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR018066  Tubby, C-terminal, conserved site
 IPR025659  Tubby-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001895 retina homeostasis IEA
 biological_processGO:0006910 phagocytosis, recognition IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0016358 dendrite development IEA
 biological_processGO:0042462 eye photoreceptor cell development IEA
 biological_processGO:0045494 photoreceptor cell maintenance IEA
 biological_processGO:0050766 positive regulation of phagocytosis IEA
 biological_processGO:0050908 detection of light stimulus involved in visual perception IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:1903546 protein localization to photoreceptor outer segment IEA
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0001917 photoreceptor inner segment IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043679 axon terminus IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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