ENSDARG00000063672


Danio rerio

Features
Gene ID: ENSDARG00000063672
  
Biological name :zmp:0000000711
  
Synonyms : zmp:0000000711
  
Possible biological names infered from orthology : O75386 / O88413 / tubby like protein 3 / TULP3
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 1469106
Gene end: 1497384
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000087668
NCBI entrez gene - 566221     See in Manteia.
RefSeq - XM_689489
swissprot - A0A286YB09
swissprot - F1R8G2
ZFIN ID - ZDB-GENE-130530-714
Ensembl - ENSDARG00000063672
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TULP3ENSGALG00000013424Gallus gallus
 TULP3ENSG00000078246Homo sapiens
 Tulp3ENSMUSG00000001521Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tub / tubby bipartite transcription factor / P50586* / P50607*ENSDARG0000006216565
si:dkey-220f10.4 / TULP2* / O00295* / P46686* / tubby like protein 2*ENSDARG0000006290245
tulp1a / tubby like protein 1a / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG0000007529544
tulp1b / tubby like protein 1b / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG0000007821043
tulp4b / tubby like protein 4b / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000006305624
tulp4a / tubby like protein 4a / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000004591124
wdr35 / WD repeat domain 35 / Q8BND3* / Q9P2L0*ENSDARG0000006926922


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR005398  Tubby, N-terminal
 IPR018066  Tubby, C-terminal, conserved site
 IPR025659  Tubby-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0097500 receptor localization to non-motile cilium IBA
 biological_processGO:1903546 protein localization to photoreceptor outer segment IBA
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
Hedgehog off state


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000037406 wdr19 / WD repeat domain 19 / Q3UGF1* / Q8NEZ3*  / reaction / complex
 ENSDARG00000055659 gpr161 / Q90X46 / G protein-coupled receptor 161 / B2RPY5* / Q8N6U8*  / complex / reaction
 ENSDARG00000031886 ift140 / intraflagellar transport 140 homolog (Chlamydomonas) / E9PY46* / Q96RY7* / Intraflagellar transport * / intraflagellar transport 140*  / complex / reaction
 ENSDARG00000058903 si:ch211-237c6.4 / B2RPY5* / GPR161* / Q8N6U8* / G protein-coupled receptor 161*  / complex / reaction
 ENSDARG00000069269 wdr35 / WD repeat domain 35 / Q8BND3* / Q9P2L0*  / complex / reaction
 ENSDARG00000012368 ttc21b / tetratricopeptide repeat domain 21B / Q0HA38* / Q7Z4L5*  / complex / reaction






 

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