ENSG00000132300


Homo sapiens

Features
Gene ID: ENSG00000132300
  
Biological name :PTCD3
  
Synonyms : pentatricopeptide repeat domain 3 / PTCD3 / Q96EY7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p11.2
Gene start: 86106182
Gene end: 86142157
  
Corresponding Affymetrix probe sets: 217895_at (Human Genome U133 Plus 2.0 Array)   228020_at (Human Genome U133 Plus 2.0 Array)   228512_at (Human Genome U133 Plus 2.0 Array)   228590_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386963
Ensembl peptide - ENSP00000487135
Ensembl peptide - ENSP00000394441
Ensembl peptide - ENSP00000254630
Ensembl peptide - ENSP00000386922
NCBI entrez gene - 55037     See in Manteia.
OMIM - 614918
RefSeq - NM_017952
RefSeq Peptide - NP_060422
swissprot - Q96EY7
swissprot - F8WE76
swissprot - F8WBP9
swissprot - B8ZZQ4
Ensembl - ENSG00000132300
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptcd3ENSDARG00000103856Danio rerio
 PTCD3ENSGALG00000015773Gallus gallus
 Ptcd3ENSMUSG00000063884Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR037387  Pentatricopeptide repeat domain-containing protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0032543 mitochondrial translation IEA
 biological_processGO:0070125 mitochondrial translational elongation TAS
 biological_processGO:0070126 mitochondrial translational termination TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0005886 plasma membrane IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial translation initiation
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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