ENSGALG00000015773


Gallus gallus

Features
Gene ID: ENSGALG00000015773
  
Biological name :PTCD3
  
Synonyms : pentatricopeptide repeat domain 3 / PTCD3
  
Possible biological names infered from orthology : Pentatricopeptide repeat domain-containing protein 3, mitochondrial / Q14C51 / Q96EY7
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 86049566
Gene end: 86064451
  
Corresponding Affymetrix probe sets: Gga.5971.1.S1_at (Chicken Array)   GgaAffx.21451.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025393
Ensembl peptide - ENSGALP00000059195
Ensembl peptide - ENSGALP00000045596
NCBI entrez gene - 422911     See in Manteia.
RefSeq - XM_420852
swissprot - A0A1L1RKC2
swissprot - A0A1D5NYY5
swissprot - F1ND93
Ensembl - ENSGALG00000015773
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptcd3ENSDARG00000103856Danio rerio
 PTCD3ENSG00000132300Homo sapiens
 Ptcd3ENSMUSG00000063884Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032543 mitochondrial translation IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr