ENSMUSG00000063884


Mus musculus

Features
Gene ID: ENSMUSG00000063884
  
Biological name :Ptcd3
  
Synonyms : Pentatricopeptide repeat domain-containing protein 3, mitochondrial / Ptcd3 / Q14C51
  
Possible biological names infered from orthology : pentatricopeptide repeat domain 3 / Q96EY7
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: C1
Gene start: 71880638
Gene end: 71908750
  
Corresponding Affymetrix probe sets: 10545346 (MoGene1.0st)   1428090_at (Mouse Genome 430 2.0 Array)   1443152_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000080743
Ensembl peptide - ENSMUSP00000146260
Ensembl peptide - ENSMUSP00000145813
Ensembl peptide - ENSMUSP00000145566
NCBI entrez gene - 69956     See in Manteia.
MGI - MGI:1917206
RefSeq - XM_006506573
RefSeq - XM_011241461
RefSeq - XM_006506574
RefSeq - NM_027275
RefSeq Peptide - NP_081551
swissprot - Q14C51
swissprot - A0A0U1RQ61
swissprot - A0A0U1RNH5
swissprot - A0A0U1RP36
Ensembl - ENSMUSG00000063884
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptcd3ENSDARG00000103856Danio rerio
 PTCD3ENSGALG00000015773Gallus gallus
 PTCD3ENSG00000132300Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat
 IPR037387  Pentatricopeptide repeat domain-containing protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0032543 mitochondrial translation IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0043024 ribosomal small subunit binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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