ENSG00000134200


Homo sapiens

Features
Gene ID: ENSG00000134200
  
Biological name :TSHB
  
Synonyms : P01222 / thyroid stimulating hormone beta / TSHB
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p13.2
Gene start: 115029824
Gene end: 115034309
  
Corresponding Affymetrix probe sets: 214529_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000256592
Ensembl peptide - ENSP00000358530
NCBI entrez gene - 7252     See in Manteia.
OMIM - 188540
RefSeq - XM_011542065
RefSeq - NM_000549
RefSeq Peptide - NP_000540
swissprot - P01222
Ensembl - ENSG00000134200
  
Related genetic diseases (OMIM): 275100 - Hypothyroidism, congenital, nongoitrous 4, 275100
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU929146.1ENSDARG00000110110Danio rerio
 tshbaENSDARG00000033726Danio rerio
 TSHBENSGALG00000002550Gallus gallus
 TshbENSMUSG00000027857Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LHB / P01229 / luteinizing hormone beta polypeptideENSG0000010482636
CGB1 / A6NKQ9 / chorionic gonadotropin beta subunit 1ENSG0000026763135
CGB8 / P0DN86 / chorionic gonadotropin beta subunit 8ENSG0000021303035
CGB7 / P0DN87 / chorionic gonadotropin beta subunit 7ENSG0000019633735
CGB3 / P0DN86 / chorionic gonadotropin beta subunit 3ENSG0000010482735
FSHB / P01225 / follicle stimulating hormone beta subunitENSG0000013180835
CGB2 / chorionic gonadotropin beta subunit 2ENSG0000010481835
CGB5 / P0DN86 / chorionic gonadotropin beta subunit 5ENSG0000018905235
AC008687.1ENSG0000026733533


Protein motifs (from Interpro)
Interpro ID Name
 IPR001545  Gonadotropin, beta subunit
 IPR006208  Glycoprotein hormone subunit beta
 IPR018245  Gonadotropin, beta subunit, conserved site
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0007267 cell-cell signaling TAS
 biological_processGO:0009653 anatomical structure morphogenesis TAS
 biological_processGO:0009755 hormone-mediated signaling pathway IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0016486 peptide hormone processing TAS
 biological_processGO:0033189 response to vitamin A IEA
 biological_processGO:0043627 response to estrogen IEA
 biological_processGO:0051592 response to calcium ion IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005179 hormone activity TAS


Pathways (from Reactome)
Pathway description
Glycoprotein hormones
Thyroxine biosynthesis
Hormone ligand-binding receptors
G alpha (s) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000260 Wide anterior fontanel "Enlargement of the anterior fontanelle with respect to age-dependent norms." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000821 Hypothyroidism 
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 HP:0000851 Congenital hypothyroidism 
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001539 Omphalocele 
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 HP:0001615 Hoarse cry 
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 HP:0001939 Metabolism abnormality 
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 HP:0002019 Constipation 
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0006887 Mental retardation, progressive "Mental retardation is defined as a decreased intelligence quotient of varying degree. The term progressive mental retardation should be used if intelligence decreases/deteriorates over time." [HPO:curators]
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 HP:0008850 Postnatal growth retardation, severe 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000165409 TSHR / P16473 / thyroid stimulating hormone receptor  / complex / reaction
 ENSG00000135346 CGA / P01215 / glycoprotein hormones, alpha polypeptide  / reaction / complex






 

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