ENSGALG00000002550


Gallus gallus

Features
Gene ID: ENSGALG00000002550
  
Biological name :TSHB
  
Synonyms : O57340 / Thyrotropin subunit beta / TSHB
  
Possible biological names infered from orthology : P01222 / thyroid stimulating hormone beta / thyroid stimulating hormone, beta subunit
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 3979888
Gene end: 3982784
  
Corresponding Affymetrix probe sets: Gga.551.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004015
NCBI entrez gene - 395937     See in Manteia.
RefSeq - XM_015298896
RefSeq - NM_205063
RefSeq - XM_015298895
RefSeq Peptide - NP_990394
swissprot - O57340
swissprot - A5YW28
Ensembl - ENSGALG00000002550
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU929146.1ENSDARG00000110110Danio rerio
 tshbaENSDARG00000033726Danio rerio
 TSHBENSG00000134200Homo sapiens
 TshbENSMUSG00000027857Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FSHB / follicle stimulating hormone beta subunit / P01225* / Q60687* / Follitropin subunit beta *ENSGALG0000001214031


Protein motifs (from Interpro)
Interpro ID Name
 IPR001545  Gonadotropin, beta subunit
 IPR006208  Glycoprotein hormone subunit beta
 IPR018245  Gonadotropin, beta subunit, conserved site
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0009755 hormone-mediated signaling pathway IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005179 hormone activity IBA


Pathways (from Reactome)
Pathway description
Glycoprotein hormones
Thyroxine biosynthesis
Hormone ligand-binding receptors
G alpha (s) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015824 CGA / glycoprotein hormones, alpha polypeptide / P01215* / P01216* / Glycoprotein hormones alpha chain *  / complex / reaction
 ENSGALG00000010572 TSHR / thyrotropin receptor isoform 2 precursor / P16473* / P47750* / thyroid stimulating hormone receptor*  / reaction / complex






 

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contact: otassy@igbmc.fr