ENSG00000134453


Homo sapiens

Features
Gene ID: ENSG00000134453
  
Biological name :RBM17
  
Synonyms : Q96I25 / RBM17 / RNA binding motif protein 17
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: p15.1
Gene start: 6088987
Gene end: 6117457
  
Corresponding Affymetrix probe sets: 221309_at (Human Genome U133 Plus 2.0 Array)   224780_at (Human Genome U133 Plus 2.0 Array)   224781_s_at (Human Genome U133 Plus 2.0 Array)   225751_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000408214
Ensembl peptide - ENSP00000402303
Ensembl peptide - ENSP00000406024
Ensembl peptide - ENSP00000369218
Ensembl peptide - ENSP00000388638
Ensembl peptide - ENSP00000395448
NCBI entrez gene - 84991     See in Manteia.
OMIM - 606935
RefSeq - NM_001145547
RefSeq - NM_032905
RefSeq Peptide - NP_116294
RefSeq Peptide - NP_001139019
swissprot - Q5W010
swissprot - Q5W011
swissprot - Q5W012
swissprot - Q96I25
swissprot - H0Y6J6
swissprot - Q5W009
Ensembl - ENSG00000134453
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm17ENSDARG00000031346Danio rerio
 RBM17ENSGALG00000006332Gallus gallus
 Rbm17ENSMUSG00000037197Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR000504  RNA recognition motif domain
 IPR003954  RNA recognition motif domain, eukaryote
 IPR016967  Splicing factor, SPF45
 IPR034653  SPF45, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome IMP
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0043484 regulation of RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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