ENSG00000134905


Homo sapiens

Features
Gene ID: ENSG00000134905
  
Biological name :CARS2
  
Synonyms : CARS2 / cysteinyl-tRNA synthetase 2, mitochondrial / Q9HA77
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q34
Gene start: 110641412
Gene end: 110713603
  
Corresponding Affymetrix probe sets: 1557179_s_at (Human Genome U133 Plus 2.0 Array)   218153_at (Human Genome U133 Plus 2.0 Array)   231023_at (Human Genome U133 Plus 2.0 Array)   237555_at (Human Genome U133 Plus 2.0 Array)   244817_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444655
Ensembl peptide - ENSP00000443027
Ensembl peptide - ENSP00000480523
Ensembl peptide - ENSP00000257347
Ensembl peptide - ENSP00000437962
Ensembl peptide - ENSP00000438267
Ensembl peptide - ENSP00000440420
NCBI entrez gene - 79587     See in Manteia.
OMIM - 612800
RefSeq - XM_017020742
RefSeq - NM_024537
RefSeq - XM_006719953
RefSeq - XM_011521116
RefSeq - XM_017020741
RefSeq Peptide - NP_078813
swissprot - A0A087WWV1
swissprot - Q9HA77
swissprot - F5H579
swissprot - F5H623
swissprot - H0YFF0
swissprot - H0YGF2
swissprot - H0YFV1
Ensembl - ENSG00000134905
  
Related genetic diseases (OMIM): 616672 - Combined oxidative phosphorylation deficiency 27, 616672
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cars2ENSDARG00000078546Danio rerio
 CARS2ENSGALG00000016847Gallus gallus
 Cars2ENSMUSG00000056228Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CARS / P49589 / cysteinyl-tRNA synthetaseENSG0000011061935


Protein motifs (from Interpro)
Interpro ID Name
 IPR009080  Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR015803  Cysteine-tRNA ligase
 IPR024909  Cysteinyl-tRNA synthetase/mycothiol ligase
 IPR032678  tRNA synthetases class I, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006423 cysteinyl-tRNA aminoacylation IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004817 cysteine-tRNA ligase activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001414 Microvesicular steatosis 
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 HP:0001508 Failure to thrive 
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 HP:0002059 Cerebral atrophy 
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002133 Status epilepticus 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002179 Opisthotonus 
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 HP:0005484 Microcephaly, postnatal 
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0200134 Epileptic encephalopathy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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