ENSG00000136153


Homo sapiens

Features
Gene ID: ENSG00000136153
  
Biological name :LMO7
  
Synonyms : LIM domain 7 / LMO7 / Q8WWI1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q22.2
Gene start: 75620434
Gene end: 75859870
  
Corresponding Affymetrix probe sets: 1556377_s_at (Human Genome U133 Plus 2.0 Array)   202674_s_at (Human Genome U133 Plus 2.0 Array)   241140_at (Human Genome U133 Plus 2.0 Array)   242722_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431271
Ensembl peptide - ENSP00000431129
Ensembl peptide - ENSP00000431636
Ensembl peptide - ENSP00000475811
Ensembl peptide - ENSP00000435296
Ensembl peptide - ENSP00000434943
Ensembl peptide - ENSP00000434201
Ensembl peptide - ENSP00000434083
Ensembl peptide - ENSP00000433591
Ensembl peptide - ENSP00000433352
Ensembl peptide - ENSP00000432269
Ensembl peptide - ENSP00000431896
Ensembl peptide - ENSP00000317802
Ensembl peptide - ENSP00000342112
Ensembl peptide - ENSP00000349571
Ensembl peptide - ENSP00000366719
Ensembl peptide - ENSP00000366757
Ensembl peptide - ENSP00000388955
NCBI entrez gene - 4008     See in Manteia.
OMIM - 604362
RefSeq - XM_017020604
RefSeq - XM_017020582
RefSeq - XM_017020583
RefSeq - XM_017020584
RefSeq - XM_017020585
RefSeq - XM_017020586
RefSeq - XM_017020587
RefSeq - XM_017020588
RefSeq - XM_017020589
RefSeq - XM_017020590
RefSeq - XM_017020591
RefSeq - XM_017020592
RefSeq - XM_017020593
RefSeq - XM_017020594
RefSeq - XM_017020595
RefSeq - XM_017020596
RefSeq - XM_017020597
RefSeq - XM_017020598
RefSeq - XM_017020599
RefSeq - XM_017020600
RefSeq - XM_017020601
RefSeq - XM_017020602
RefSeq - XM_017020603
RefSeq - NM_001306080
RefSeq - NM_005358
RefSeq - NM_015842
RefSeq - XM_011535075
RefSeq - XM_011535078
RefSeq - XM_011535080
RefSeq - XM_011535082
RefSeq - XM_011535086
RefSeq - XM_011535094
RefSeq - XM_011535095
RefSeq - XM_017020574
RefSeq - XM_017020575
RefSeq - XM_017020576
RefSeq - XM_017020577
RefSeq - XM_017020578
RefSeq - XM_017020579
RefSeq - XM_017020580
RefSeq - XM_017020581
RefSeq Peptide - NP_001293009
RefSeq Peptide - NP_001317512
RefSeq Peptide - NP_005349
RefSeq Peptide - NP_056667
swissprot - E9PMP7
swissprot - E9PMJ6
swissprot - E9PLU6
swissprot - E9PK58
swissprot - E9PJ10
swissprot - F8WD26
swissprot - H0Y424
swissprot - E9PRJ0
swissprot - H0YDQ3
swissprot - H0YE95
swissprot - J3KP06
swissprot - Q8WWI1
swissprot - U3KQE6
swissprot - A0A0A0MTE2
swissprot - H0YDG6
swissprot - E9PRE3
swissprot - E9PMT2
swissprot - E9PMS6
Ensembl - ENSG00000136153
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lmo7aENSDARG00000004930Danio rerio
 LMO7ENSGALG00000016920Gallus gallus
 Lmo7ENSMUSG00000033060Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LIMCH1 / Q9UPQ0 / LIM and calponin homology domains 1ENSG0000006404218


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001715  Calponin homology domain
 IPR001781  Zinc finger, LIM-type
 IPR003096  Smooth muscle protein/calponin
 IPR029978  LIM domain only protein 7
 IPR031865  Domain of unknown function DUF4757
 IPR036034  PDZ superfamily
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination TAS
 biological_processGO:0016567 protein ubiquitination NAS
 biological_processGO:0023051 regulation of signaling IEA
 biological_processGO:0030155 regulation of cell adhesion IEA
 biological_processGO:0043687 post-translational protein modification TAS
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0000151 ubiquitin ligase complex NAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity TAS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0042805 actinin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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