ENSGALG00000016920


Gallus gallus

Features
Gene ID: ENSGALG00000016920
  
Biological name :LMO7
  
Synonyms : LIM domain 7 / LMO7
  
Possible biological names infered from orthology : Mus musculus LIM domain only 7 (Lmo7), transcript variant 2, mRNA. / Q8WWI1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 154868242
Gene end: 154908783
  
Corresponding Affymetrix probe sets: Gga.10600.1.S1_s_at (Chicken Array)   GgaAffx.10841.1.S1_s_at (Chicken Array)   GgaAffx.21089.1.S1_at (Chicken Array)   GgaAffx.21089.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049909
Ensembl peptide - ENSGALP00000027304
Ensembl peptide - ENSGALP00000055082
Ensembl peptide - ENSGALP00000046352
Ensembl peptide - ENSGALP00000049058
Ensembl peptide - ENSGALP00000047415
NCBI entrez gene - 418815     See in Manteia.
RefSeq - XM_417010
RefSeq - XM_015277135
RefSeq - XM_015277141
RefSeq - XM_015277143
RefSeq - XM_015277144
RefSeq - XM_015277152
RefSeq - XM_015277162
RefSeq - XM_004938639
RefSeq - XM_015277071
RefSeq - XM_015277073
RefSeq - XM_015277084
RefSeq - XM_015277097
RefSeq - XM_015277107
RefSeq - XM_015277113
RefSeq - XM_015277122
RefSeq - XM_015277129
RefSeq - XM_015277132
swissprot - A0A1D5PQC0
swissprot - A0A1D5PAZ2
swissprot - A0A1D5P8L0
swissprot - A0A1D5P409
swissprot - F1NY52
swissprot - A0A1D5P121
Ensembl - ENSGALG00000016920
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lmo7aENSDARG00000004930Danio rerio
 LMO7ENSG00000136153Homo sapiens
 Lmo7ENSMUSG00000033060Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LIMCH1 / LIM and calponin homology domains 1 / Q3UH68* / Q9UPQ0* / LIM and calponin homology domains-containing protein 1 *ENSGALG0000001425812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001781  Zinc finger, LIM-type
 IPR029978  LIM domain only protein 7
 IPR031865  Domain of unknown function DUF4757


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0023051 regulation of signaling IEA
 biological_processGO:0030155 regulation of cell adhesion IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr